Detailed information NTG1127938

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGL22_RS09345
• Genome accession: NZ_LR594048
• Coordinates: 1889814..1890746 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC11556
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1884814..1895746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL22_RS09320 (NCTC11556_01927)	tsaD	1885304..1886320 (-)	1017	WP_003056674.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
FGL22_RS09325 (NCTC11556_01928)	rimI	1886310..1886735 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
FGL22_RS09330 (NCTC11556_01929)	tsaB	1886737..1887435 (-)	699	WP_003062223.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
FGL22_RS09335 (NCTC11556_01930)	-	1887721..1887951 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
FGL22_RS09340 (NCTC11556_01931)	rnjA	1887953..1889635 (+)	1683	WP_003056700.1	ribonuclease J1	-
FGL22_RS09345 (NCTC11556_01932)	amiF	1889814..1890746 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
FGL22_RS09350 (NCTC11556_01933)	oppD	1890739..1891791 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
FGL22_RS09355 (NCTC11556_01934)	-	1891803..1892834 (-)	1032	WP_046177231.1	ABC transporter permease	-
FGL22_RS09360 (NCTC11556_01935)	-	1892844..1893758 (-)	915	WP_003052794.1	ABC transporter permease	-
FGL22_RS09365 (NCTC11556_01936)	-	1894026..1895681 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=1127938 FGL22_RS09345 WP_003060110.1 1889814..1890746(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11556]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=1127938 FGL22_RS09345 WP_003060110.1 1889814..1890746(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11556]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTATC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTTTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526