Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FGL18_RS03245 Genome accession   NZ_LR594046
Coordinates   616880..617689 (+) Length   269 a.a.
NCBI ID   WP_138125103.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain NCTC6403     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 611880..622689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL18_RS03220 (NCTC6403_00660) - 612253..612954 (-) 702 WP_138125099.1 amino acid ABC transporter permease -
  FGL18_RS03225 (NCTC6403_00661) - 612968..613768 (-) 801 WP_138125101.1 transporter substrate-binding domain-containing protein -
  FGL18_RS03230 (NCTC6403_00662) - 613768..614562 (-) 795 WP_003057217.1 amino acid ABC transporter ATP-binding protein -
  FGL18_RS03235 (NCTC6403_00663) vicR 614821..615531 (+) 711 WP_003049952.1 response regulator YycF Regulator
  FGL18_RS03240 (NCTC6403_00664) vicK 615524..616876 (+) 1353 WP_003049953.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGL18_RS03245 (NCTC6403_00665) vicX 616880..617689 (+) 810 WP_138125103.1 MBL fold metallo-hydrolase Regulator
  FGL18_RS03250 (NCTC6403_00666) rnc 617962..618654 (+) 693 WP_003057240.1 ribonuclease III -
  FGL18_RS03255 (NCTC6403_00667) smc 618655..622200 (+) 3546 WP_138125105.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30143.36 Da        Isoelectric Point: 6.0739

>NTDB_id=1127796 FGL18_RS03245 WP_138125103.1 616880..617689(+) (vicX) [Streptococcus dysgalactiae strain NCTC6403]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
VIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1127796 FGL18_RS03245 WP_138125103.1 616880..617689(+) (vicX) [Streptococcus dysgalactiae strain NCTC6403]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTCGGAAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGCGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGTATCATGAAAGATAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGCGACCGAATGACAGGT
GTTATTGAAAATGCGGATGGCTACCTGATTGAATCCAATCATGACATTGAAATTTTACGCTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAAACGAAAAAAATCTATTTGGGTCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTCCCCAGACACAGCTTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment