Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FGK99_RS06990 Genome accession   NZ_LR594033
Coordinates   1474565..1475374 (-) Length   269 a.a.
NCBI ID   WP_042357090.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain NCTC4675     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1469565..1480374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK99_RS06980 (NCTC4675_01417) - 1470679..1472610 (+) 1932 WP_042670951.1 Dam family site-specific DNA-(adenine-N6)-methyltransferase -
  FGK99_RS06985 (NCTC4675_01418) - 1472631..1474373 (-) 1743 WP_043026181.1 restriction endonuclease FokI C-terminal domain-containing protein -
  FGK99_RS06990 (NCTC4675_01419) vicX 1474565..1475374 (-) 810 WP_042357090.1 MBL fold metallo-hydrolase Regulator
  FGK99_RS06995 (NCTC4675_01420) vicK 1475378..1476730 (-) 1353 WP_012677636.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGK99_RS07000 (NCTC4675_01421) vicR 1476723..1477433 (-) 711 WP_012515994.1 response regulator YycF Regulator
  FGK99_RS07005 (NCTC4675_01422) - 1477642..1478658 (-) 1017 WP_138119569.1 DUF3114 domain-containing protein -
  FGK99_RS07010 (NCTC4675_01423) - 1478703..1479965 (-) 1263 WP_043040863.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29981.05 Da        Isoelectric Point: 5.5344

>NTDB_id=1127185 FGK99_RS06990 WP_042357090.1 1474565..1475374(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
MSEVGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVAQKHVFERGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAG
IIENADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1127185 FGK99_RS06990 WP_042357090.1 1474565..1475374(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain NCTC4675]
ATGAGTGAGGTTGGCTTTAAATATAGTATTTTAGCATCAGGATCGACAGGGAACTGCTTTTACTTGGAAACGCCCAAGAA
GCGGTTGTTGATTGATGCAGGACTGACTGGAAAGAAAATCACTAGTCTCCTTGCTGAGATTGACAGAAGGCCTGAGGATT
TGGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGTGTTGGAATCATGGCTCGAAAATATAACCTAGAT
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGCAACCTAGACGTCGCACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTGTAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAAGTCCTTTGTCATGCTGACGGATACAGGATATGTGAGCGACCGCTTGGCTGGG
ATCATTGAAAATGCTGACGGCTACTTGATTGAGTCAAATCACGATGTGGAGATATTGCGAGCCGGCTCTTATCCTTGGAG
CCTCAAGCAGCGAATCTTATCTGACCTAGGGCATTTATCCAATGAAGATGGTGCCGGTGCCATGATTCGAAGCTTGGGCA
ATAAAACCAAGAAAATCTACCTCGGTCACCTAAGTCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGATACCTCACCAGATACCGCCTGCCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751

Multiple sequence alignment