Detailed information NTG1126871

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGK94_RS04855
• Genome accession: NZ_LR590471
• Coordinates: 1057894..1058829 (-)
• Length: 311 a.a.
• NCBI ID: WP_012514940.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain NCTC11854
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1052894..1063829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK94_RS04830 (NCTC11854_00993)	tsaD	1052932..1053948 (-)	1017	WP_126436307.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
FGK94_RS04835 (NCTC11854_00994)	rimI	1053938..1054363 (-)	426	WP_043029339.1	ribosomal protein S18-alanine N-acetyltransferase	-
FGK94_RS04840 (NCTC11854_00995)	tsaB	1054366..1055064 (-)	699	WP_043029338.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
FGK94_RS04845 (NCTC11854_00996)	-	1055350..1055580 (+)	231	WP_012678542.1	DNA-dependent RNA polymerase subunit epsilon	-
FGK94_RS04850 (NCTC11854_00997)	rnjA	1055582..1057264 (+)	1683	WP_012514941.1	ribonuclease J1	-
FGK94_RS04855 (NCTC11854_00998)	amiF	1057894..1058829 (-)	936	WP_012514940.1	ABC transporter ATP-binding protein	Regulator
FGK94_RS04860 (NCTC11854_00999)	oppD	1058829..1059875 (-)	1047	WP_043029337.1	ABC transporter ATP-binding protein	Regulator
FGK94_RS04865 (NCTC11854_01000)	-	1059887..1060918 (-)	1032	WP_043029336.1	ABC transporter permease	-
FGK94_RS04870 (NCTC11854_01001)	-	1060928..1061842 (-)	915	WP_012678546.1	ABC transporter permease	-
FGK94_RS04875 (NCTC11854_01002)	-	1062009..1063667 (-)	1659	WP_012678547.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 311 a.a.
• Molecular weight: 35067.17 Da
• Isoelectric Point: 8.3565

>NTDB_id=1126871 FGK94_RS04855 WP_012514940.1 1057894..1058829(-) (amiF) [Streptococcus equi subsp. zooepidemicus strain NCTC11854]
MTEARKKLIEVKNVSLTFNKGKKNEVKAIDRLSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISDGEIIFNGENVSQL
KGKKLHSFRKHAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREARVQELLKLVGLNQDHLTRYPHEFSGGQRQ
RIGIARALAVKPTFIIADEPISALDVSIQAQVVSLMQQLQKKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDE
VYNHPIHPYTKSLISAIPEPDPEKERRRIAEVYDPSQELDGQERQMYEITPGHFVLATQAEADQYRAERGL

Nucleotide

• Length: 936 bp

>NTDB_id=1126871 FGK94_RS04855 WP_012514940.1 1057894..1058829(-) (amiF) [Streptococcus equi subsp. zooepidemicus strain NCTC11854]
ATGACAGAAGCTCGTAAAAAATTAATCGAAGTAAAGAATGTTTCCTTAACCTTTAACAAGGGGAAGAAAAACGAGGTTAA
GGCTATTGATCGCCTTAGCTTTGACATTTATGAGGGGGAAGTATTTGGCCTTGTTGGGGAATCAGGCTCAGGCAAGACGA
CAGTTGGTCGAGCTATTTTGAAATTGTATGATATTAGTGATGGCGAGATTATCTTTAATGGAGAAAACGTCTCCCAATTA
AAGGGGAAAAAGCTGCATAGCTTTCGTAAGCATGCGCAAATGATCTTCCAAGATCCTCAGGCTAGTCTGAACGGTCGCAT
GAAAATCAGAGACATTGTTGCAGAGGGCTTAGACATTCATGGCTTGACAGCCTCAAAGGCAGAGCGTGAGGCAAGAGTCC
AAGAGCTGTTAAAGCTTGTTGGGCTTAATCAGGATCATTTGACGCGGTACCCACATGAATTTTCTGGTGGCCAACGCCAG
CGGATTGGCATTGCGCGTGCCCTGGCTGTGAAGCCGACCTTTATTATCGCAGATGAGCCGATTTCAGCGCTTGATGTGTC
GATTCAAGCACAGGTAGTGAGTCTCATGCAGCAATTGCAAAAGAAGCGCGGCTTGACCTATCTCTTTATCGCACACGATT
TGTCTATGGTCAAATACATTTCAGACCGTATTGGTGTGATGCATTGGGGCAAAATGCTTGAGATTGGAACATCTGATGAG
GTTTACAATCACCCGATTCACCCTTATACGAAAAGCTTGATCTCGGCCATTCCTGAGCCGGATCCTGAAAAGGAGCGTAG
GCGCATTGCAGAGGTTTATGATCCTAGTCAAGAGCTAGATGGCCAAGAGCGGCAAATGTATGAAATCACTCCTGGGCATT
TTGTCTTAGCGACGCAGGCCGAAGCCGATCAGTATCGAGCAGAGCGTGGCCTCTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	53.922	98.392	0.531
amiF	Streptococcus thermophilus LMG 18311	53.595	98.392	0.527
amiF	Streptococcus salivarius strain HSISS4	53.268	98.392	0.524