Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABBFA_RS09615 | Genome accession | NZ_CP001172 |
| Coordinates | 2050687..2051067 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii AB307-0294 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2045687..2056067
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABBFA_RS09585 (ABBFA_01883) | tadA | 2045806..2046309 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| ABBFA_RS09590 (ABBFA_01884) | - | 2046316..2047440 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABBFA_RS09595 (ABBFA_01885) | ung | 2047437..2048150 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ABBFA_RS09600 (ABBFA_01886) | - | 2048201..2048797 (-) | 597 | WP_000908449.1 | 6-carboxytetrahydropterin synthase | - |
| ABBFA_RS09605 (ABBFA_01887) | gspK | 2049027..2049986 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| ABBFA_RS09610 (ABBFA_01888) | xcpW | 2049986..2050687 (-) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABBFA_RS09615 (ABBFA_01889) | xcpV | 2050687..2051067 (-) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABBFA_RS09620 (ABBFA_01890) | - | 2051057..2051611 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABBFA_RS09625 (ABBFA_01891) | - | 2051621..2052229 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABBFA_RS09630 (ABBFA_01892) | - | 2052267..2053040 (-) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| ABBFA_RS09635 (ABBFA_01893) | - | 2053058..2053399 (-) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| ABBFA_RS09640 (ABBFA_01894) | - | 2053411..2054391 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ABBFA_RS09645 (ABBFA_01895) | kdsB | 2054403..2055164 (-) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=111447 ABBFA_RS09615 WP_000836914.1 2050687..2051067(-) (xcpV) [Acinetobacter baumannii AB307-0294]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=111447 ABBFA_RS09615 WP_000836914.1 2050687..2051067(-) (xcpV) [Acinetobacter baumannii AB307-0294]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |