Detailed information NTG1108159

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACNBEW_RS05640
• Genome accession: NZ_CP184280
• Coordinates: 1092252..1093205 (+)
• Length: 317 a.a.
• NCBI ID: WP_007610578.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GHZJ
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1087252..1098205

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNBEW_RS05615 (ACNBEW_05615)	argF	1089072..1090043 (+)	972	WP_032874446.1	ornithine carbamoyltransferase	-
ACNBEW_RS05620 (ACNBEW_05620)	-	1090119..1090298 (+)	180	WP_003155070.1	YjzC family protein	-
ACNBEW_RS05625 (ACNBEW_05625)	-	1090335..1090520 (-)	186	WP_032874447.1	YjzD family protein	-
ACNBEW_RS05630 (ACNBEW_05630)	-	1090779..1091513 (+)	735	WP_032874448.1	hypothetical protein	-
ACNBEW_RS05635 (ACNBEW_05635)	-	1091596..1092162 (+)	567	WP_032874449.1	hypothetical protein	-
ACNBEW_RS05640 (ACNBEW_05640)	med	1092252..1093205 (+)	954	WP_007610578.1	BMP family ABC transporter substrate-binding protein	Regulator
ACNBEW_RS05645 (ACNBEW_05645)	comZ	1093218..1093409 (+)	192	WP_003155061.1	ComZ family protein	Regulator
ACNBEW_RS05650 (ACNBEW_05650)	-	1093438..1093656 (-)	219	WP_032874450.1	hypothetical protein	-
ACNBEW_RS05655 (ACNBEW_05655)	-	1093824..1094762 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
ACNBEW_RS05660 (ACNBEW_05660)	fabF	1094785..1096023 (+)	1239	WP_032874451.1	beta-ketoacyl-ACP synthase II	-
ACNBEW_RS05665 (ACNBEW_05665)	-	1096106..1096891 (+)	786	WP_029325951.1	DUF2268 domain-containing protein	-
ACNBEW_RS05670 (ACNBEW_05670)	-	1097065..1098051 (+)	987	WP_029325950.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35357.02 Da
• Isoelectric Point: 4.6686

>NTDB_id=1108159 ACNBEW_RS05640 WP_007610578.1 1092252..1093205(+) (med) [Bacillus velezensis strain GHZJ]
MITRLVMIFSLLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1108159 ACNBEW_RS05640 WP_007610578.1 1092252..1093205(+) (med) [Bacillus velezensis strain GHZJ]
TTGATCACCAGGCTTGTCATGATCTTTTCTCTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGACAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAAAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.233	100	0.782