Detailed information NTG1107221

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACM5XX_RS06160
• Genome accession: NZ_CP183946
• Coordinates: 1163301..1164254 (+)
• Length: 317 a.a.
• NCBI ID: WP_003155063.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain HKSSLJEBR3
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1158301..1169254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM5XX_RS06135 (ACM5XX_06135)	argF	1160119..1161090 (+)	972	WP_014304779.1	ornithine carbamoyltransferase	-
ACM5XX_RS06140 (ACM5XX_06140)	-	1161166..1161345 (+)	180	WP_003155070.1	YjzC family protein	-
ACM5XX_RS06145 (ACM5XX_06145)	-	1161382..1161567 (-)	186	WP_003155069.1	YjzD family protein	-
ACM5XX_RS06150 (ACM5XX_06150)	-	1161828..1162562 (+)	735	WP_014304780.1	hypothetical protein	-
ACM5XX_RS06155 (ACM5XX_06155)	-	1162645..1163211 (+)	567	WP_041481852.1	hypothetical protein	-
ACM5XX_RS06160 (ACM5XX_06160)	med	1163301..1164254 (+)	954	WP_003155063.1	BMP family ABC transporter substrate-binding protein	Regulator
ACM5XX_RS06165 (ACM5XX_06165)	comZ	1164267..1164458 (+)	192	WP_003155061.1	ComZ family protein	Regulator
ACM5XX_RS06170 (ACM5XX_06170)	-	1164488..1164706 (-)	219	WP_003155059.1	hypothetical protein	-
ACM5XX_RS06175 (ACM5XX_06175)	-	1164874..1165812 (+)	939	WP_003155057.1	beta-ketoacyl-ACP synthase III	-
ACM5XX_RS06180 (ACM5XX_06180)	fabF	1165835..1167073 (+)	1239	WP_003155056.1	beta-ketoacyl-ACP synthase II	-
ACM5XX_RS06185 (ACM5XX_06185)	-	1167157..1167942 (+)	786	WP_012117278.1	DUF2268 domain-containing protein	-
ACM5XX_RS06190 (ACM5XX_06190)	-	1168116..1169102 (+)	987	WP_014304782.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35345.94 Da
• Isoelectric Point: 4.5594

>NTDB_id=1107221 ACM5XX_RS06160 WP_003155063.1 1163301..1164254(+) (med) [Bacillus velezensis strain HKSSLJEBR3]
MITRLVMIFSVLLLLSGCTQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1107221 ACM5XX_RS06160 WP_003155063.1 1163301..1164254(+) (med) [Bacillus velezensis strain HKSSLJEBR3]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCACACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTCCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGTGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAATCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785