Detailed information NTG1107094

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ACLKM1_RS11880
• Genome accession: NZ_CP183903
• Coordinates: 2476891..2479044 (-)
• Length: 717 a.a.
• NCBI ID: WP_411689826.1
• Uniprot ID: -
• Organism: Acinetobacter pseudolwoffii strain M5_NDM
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2471891..2484044

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKM1_RS11865	-	2474325..2475197 (-)	873	WP_411689823.1	hypothetical protein	-
ACLKM1_RS11870	aroB	2475210..2476289 (-)	1080	WP_411689825.1	3-dehydroquinate synthase	-
ACLKM1_RS11875	aroK	2476318..2476854 (-)	537	WP_180186049.1	shikimate kinase AroK	-
ACLKM1_RS11880	pilQ	2476891..2479044 (-)	2154	WP_411689826.1	type IV pilus secretin PilQ	Machinery gene
ACLKM1_RS11885	pilP	2479061..2479588 (-)	528	WP_005094322.1	pilus assembly protein PilP	Machinery gene
ACLKM1_RS11890	comO	2479588..2480301 (-)	714	WP_005094323.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACLKM1_RS11895	comN	2480298..2480936 (-)	639	WP_005094324.1	PilN domain-containing protein	Machinery gene
ACLKM1_RS11900	pilM	2480936..2481994 (-)	1059	WP_005168888.1	pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 717 a.a.
• Molecular weight: 77620.85 Da
• Isoelectric Point: 5.0572

>NTDB_id=1107094 ACLKM1_RS11880 WP_411689826.1 2476891..2479044(-) (pilQ) [Acinetobacter pseudolwoffii strain M5_NDM]
MNKSIKEFIFGDANTMNRVFRQFSMGTVAIAVMQAASAQVAVTNIVAMQLPGQGTEIRVMFNGLPPQPQAYQLESPSRLI
LDFDQAQQNLKQSNIPVATREASSVDVTSDAQRARLTVNLTEVGAFTTRVEGNTFILKINSATPVAMAQPVQQQSAQGIS
NIGFQRGVQGEGQVVIDLAGNNTPVDVQQQGTKVIVRTLGSKIPAHLTRRLNVTDFATPVSSVDAVNQNGSGVITIQSAE
SYEYMAYQTDNKLTISLKRPEAKSPLRPKTVAYTGKKISLDFQDIEVRRVLQLLADFTDINMVAADSVQGNITLRLKEVP
WDQALDIVLKTKNLDKRRNGNVIWIAPVAELIKAEEEEAKAIKQSVALAPIQTEYMQLSYAKAADIEKLITQNKGASGSG
GSSSTNNNDGGESLLSSRGSVSVDARTNTIIVNDTQLFIDKIRNMVDLLDVQVKQVMVEARIVRATTDFTKEMGVKWGIL
SQGITNNDSLLVGGSDTTLWDLKTPDDDGKYTIQRPDNLNVDLGVTSQGASRIAFGLISLSDFMLDLELSALQADGYGEV
ISTPKVLTADKQKATVASGSQIPYQSAEGGGTNAVSTTAFIDATLSLDVTPSITPDGKVQMELNITSDSPGNPTPTGQLT
INKNQINTNVLVDNGETVVLGGIFEQETRNAQTKVPFLGDIPYVGRLFRKDLKSDNKRELLIFVTPRIVNDSVSRNH

Nucleotide

• Length: 2154 bp

>NTDB_id=1107094 ACLKM1_RS11880 WP_411689826.1 2476891..2479044(-) (pilQ) [Acinetobacter pseudolwoffii strain M5_NDM]
ATGAATAAGAGTATTAAAGAATTTATTTTTGGGGATGCTAATACAATGAATCGTGTGTTTCGTCAGTTTTCAATGGGTAC
TGTTGCGATTGCGGTGATGCAAGCAGCTAGCGCGCAGGTAGCCGTGACCAATATCGTAGCTATGCAGCTTCCTGGACAAG
GAACTGAAATTCGGGTGATGTTCAATGGTTTGCCACCACAGCCACAGGCCTATCAATTAGAATCACCTTCACGTCTAATT
TTAGATTTTGACCAGGCCCAACAGAATTTAAAACAAAGCAACATTCCGGTCGCAACGCGTGAAGCCAGTTCGGTCGATGT
TACTTCGGATGCACAACGTGCCCGTTTGACGGTTAATCTGACCGAGGTTGGCGCTTTTACGACTCGCGTGGAAGGCAATA
CCTTTATTCTTAAAATTAACTCGGCAACTCCTGTTGCCATGGCTCAACCTGTACAGCAACAGTCAGCTCAGGGTATCAGT
AATATTGGTTTCCAGCGCGGTGTGCAAGGTGAAGGTCAGGTGGTCATTGATCTGGCGGGAAATAATACACCAGTCGATGT
ACAGCAGCAGGGTACCAAAGTTATTGTGCGGACTTTAGGCTCTAAAATCCCTGCACATTTGACCCGTCGACTCAATGTGA
CTGATTTCGCGACTCCGGTATCCAGTGTCGATGCCGTGAATCAAAATGGTTCAGGAGTCATTACGATTCAGTCTGCGGAA
AGTTATGAATATATGGCTTATCAGACTGATAACAAGCTGACCATCAGTTTGAAACGACCAGAAGCCAAGAGTCCATTGCG
TCCTAAAACCGTTGCCTATACCGGTAAGAAGATTTCTTTAGATTTTCAGGACATCGAAGTCCGTCGTGTACTACAGCTCT
TAGCCGATTTCACCGATATCAATATGGTGGCAGCAGACAGTGTACAAGGCAATATTACCTTGCGCTTAAAAGAAGTGCCG
TGGGATCAGGCGCTGGATATTGTGCTGAAAACCAAAAACCTGGATAAACGCCGTAATGGCAATGTGATCTGGATCGCACC
AGTTGCAGAGCTGATTAAGGCTGAGGAGGAAGAAGCTAAGGCTATTAAGCAGAGTGTTGCACTTGCCCCTATCCAAACTG
AATATATGCAGCTGAGTTATGCCAAAGCCGCTGATATTGAGAAACTAATTACGCAGAATAAAGGGGCATCTGGCTCAGGC
GGTTCGAGTAGCACGAATAATAATGATGGTGGAGAAAGCTTATTAAGTTCACGTGGTTCTGTGTCTGTTGATGCACGGAC
CAATACCATTATTGTGAATGATACTCAGCTCTTTATAGATAAAATCCGGAATATGGTGGACCTGCTGGACGTGCAGGTTA
AGCAGGTGATGGTCGAAGCACGTATTGTGCGAGCTACCACTGACTTCACTAAAGAGATGGGAGTGAAGTGGGGGATTCTA
TCTCAAGGGATTACCAACAATGATAGCCTTCTGGTCGGTGGTAGTGACACGACGTTATGGGATTTAAAAACACCTGATGA
TGATGGTAAGTATACGATTCAACGGCCGGATAATCTTAATGTGGACTTGGGTGTTACCAGCCAAGGAGCAAGCCGTATTG
CCTTTGGTTTGATCAGCCTCTCTGATTTTATGCTGGATCTGGAGCTTTCTGCACTTCAGGCAGACGGTTATGGTGAAGTG
ATTTCTACCCCTAAAGTACTGACTGCGGATAAGCAAAAAGCGACTGTGGCTTCGGGCTCACAAATTCCGTATCAATCTGC
TGAAGGCGGGGGTACTAATGCCGTGTCGACTACAGCATTTATTGATGCCACCTTAAGTCTGGATGTTACGCCAAGTATTA
CGCCGGATGGTAAAGTACAGATGGAACTTAATATTACCAGTGACTCTCCAGGCAACCCGACACCGACCGGACAGCTCACT
ATTAACAAAAACCAGATCAACACCAATGTTTTGGTAGATAATGGTGAAACAGTCGTTTTAGGTGGTATTTTTGAGCAAGA
AACCCGTAATGCACAAACTAAGGTACCATTCTTGGGGGATATCCCTTATGTAGGACGTTTATTCCGTAAAGATTTAAAGT
CGGATAACAAACGTGAGTTACTGATTTTCGTTACACCTCGAATTGTTAATGACAGTGTTTCAAGAAATCATTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (551-709)

• Secretin and TonB N terminus short domain (STN) (305-347)

• Bacterial type II/III secretion system short domain (Secretin_N) (375-455)

• AMIN domain (AMIN) (55-132)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	73.066	100	0.738
pilQ	Acinetobacter baumannii strain A118	73.066	100	0.738
comQ	Acinetobacter baylyi ADP1	71.208	99.303	0.707
pilQ	Pseudomonas aeruginosa PAK	41.289	100	0.42
pilQ	Legionella pneumophila strain Lp02	37.447	98.326	0.368
pilQ	Legionella pneumophila strain ERS1305867	37.861	96.513	0.365