Detailed information NTG1105963

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: V3C22_RS08440
• Genome accession: NZ_CP183775
• Coordinates: 1720828..1721322 (-)
• Length: 164 a.a.
• NCBI ID: WP_002261867.1
• Uniprot ID: A0AAX1K2T1
• Organism: Streptococcus mutans strain Xc
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1715828..1726322

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V3C22_RS08405 (V3C22_08405)	-	1715956..1716177 (+)	222	WP_002280751.1	hypothetical protein	-
V3C22_RS08410 (V3C22_08410)	-	1716574..1717518 (+)	945	WP_002262667.1	magnesium transporter CorA family protein	-
V3C22_RS08415 (V3C22_08415)	-	1717673..1718335 (+)	663	WP_002304961.1	DUF1129 domain-containing protein	-
V3C22_RS08420 (V3C22_08420)	hdrR	1718474..1718830 (+)	357	WP_002268419.1	LytTR family transcriptional regulator HdrR	Regulator
V3C22_RS08425 (V3C22_08425)	hdrM	1718827..1719513 (+)	687	WP_002265269.1	hdrR negative regulator HdrM	Regulator
V3C22_RS08430 (V3C22_08430)	-	1719521..1720240 (-)	720	WP_014677769.1	TraX family protein	-
V3C22_RS08435 (V3C22_08435)	rpsR	1720559..1720798 (-)	240	WP_000068664.1	30S ribosomal protein S18	-
V3C22_RS08440 (V3C22_08440)	ssbA	1720828..1721322 (-)	495	WP_002261867.1	single-stranded DNA-binding protein	Machinery gene
V3C22_RS08445 (V3C22_08445)	rpsF	1721340..1721630 (-)	291	WP_002261866.1	30S ribosomal protein S6	-
V3C22_RS08450 (V3C22_08450)	-	1721786..1722031 (-)	246	WP_002276385.1	hypothetical protein	-
V3C22_RS08455 (V3C22_08455)	-	1722336..1722506 (+)	171	WP_002284761.1	hypothetical protein	-
V3C22_RS08460 (V3C22_08460)	mutY	1723577..1724722 (+)	1146	WP_002264191.1	A/G-specific adenine glycosylase	-
V3C22_RS08465 (V3C22_08465)	-	1724914..1725963 (-)	1050	WP_226707079.1	zinc-binding dehydrogenase	-

Sequence

Protein

• Length: 164 a.a.
• Molecular weight: 18331.97 Da
• Isoelectric Point: 4.7187

>NTDB_id=1105963 V3C22_RS08440 WP_002261867.1 1720828..1721322(-) (ssbA) [Streptococcus mutans strain Xc]
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINIVIWRQQAENLANWAKKGTLLGITGRIQTR
NYENQQGQRVYVTEVVADNFQILESRATREGQSNSYNAGGNNNFGGNNFSSQGSSQSQTPNFARDESPFGDSNPMDISDD
DLPF

Nucleotide

• Length: 495 bp

>NTDB_id=1105963 V3C22_RS08440 WP_002261867.1 1720828..1721322(-) (ssbA) [Streptococcus mutans strain Xc]
ATGATTAATAATGTAGTACTAGTTGGTCGCATGACTCGTGATGCTGAGCTCCGTTACACCCCAAGTAATCAAGCTGTGGC
AACTTTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTCATTAATATCGTGATTT
GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAGGGGACTCTTTTAGGCATTACTGGTCGAATCCAGACCCGC
AATTATGAAAACCAACAAGGTCAGCGTGTTTACGTCACAGAAGTTGTTGCGGATAATTTCCAAATTTTGGAAAGTCGTGC
TACACGTGAAGGTCAATCAAACAGTTATAATGCTGGTGGTAACAATAACTTTGGCGGAAATAATTTTTCTTCCCAAGGTT
CTTCACAATCTCAAACGCCAAACTTTGCTAGAGATGAAAGTCCATTTGGTGATTCAAATCCTATGGATATTTCAGACGAT
GATCTTCCGTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	57.062	100	0.616
ssb	Latilactobacillus sakei subsp. sakei 23K	57.059	100	0.591
ssbB/cilA	Streptococcus pneumoniae TIGR4	51.261	72.561	0.372
ssb	Glaesserella parasuis strain SC1401	32.62	100	0.372
ssbB	Streptococcus sobrinus strain NIDR 6715-7	52.632	69.512	0.366
ssbB/cilA	Streptococcus mitis NCTC 12261	50.42	72.561	0.366
ssbB/cilA	Streptococcus pneumoniae Rx1	50.42	72.561	0.366
ssbB/cilA	Streptococcus pneumoniae D39	50.42	72.561	0.366
ssbB/cilA	Streptococcus pneumoniae R6	50.42	72.561	0.366
ssbB/cilA	Streptococcus mitis SK321	50.42	72.561	0.366