Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACM591_RS05890 Genome accession   NZ_CP183486
Coordinates   1308097..1309140 (+) Length   347 a.a.
NCBI ID   WP_029378980.1    Uniprot ID   -
Organism   Staphylococcus sp. Ze2     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1303097..1314140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM591_RS05865 (ACM591_05865) - 1304053..1304775 (+) 723 WP_029378975.1 type 1 glutamine amidotransferase -
  ACM591_RS05870 (ACM591_05870) - 1304976..1305962 (-) 987 WP_029378976.1 FUSC family protein -
  ACM591_RS05875 (ACM591_05875) map 1306139..1306891 (+) 753 WP_029378977.1 type I methionyl aminopeptidase -
  ACM591_RS05880 (ACM591_05880) - 1306996..1307382 (+) 387 WP_326026239.1 hypothetical protein -
  ACM591_RS05885 (ACM591_05885) liaF 1307399..1308100 (+) 702 WP_029378979.1 cell wall-active antibiotics response protein LiaF -
  ACM591_RS05890 (ACM591_05890) vraS 1308097..1309140 (+) 1044 WP_029378980.1 sensor histidine kinase Regulator
  ACM591_RS05895 (ACM591_05895) vraR 1309130..1309759 (+) 630 WP_017723494.1 response regulator transcription factor Regulator
  ACM591_RS05900 (ACM591_05900) - 1310028..1311173 (-) 1146 WP_029378981.1 YihY/virulence factor BrkB family protein -
  ACM591_RS05905 (ACM591_05905) - 1311529..1311813 (-) 285 WP_029378982.1 hypothetical protein -
  ACM591_RS05910 (ACM591_05910) - 1311820..1312284 (-) 465 WP_326026237.1 low molecular weight protein-tyrosine-phosphatase -
  ACM591_RS05915 (ACM591_05915) - 1312419..1312622 (+) 204 WP_017723498.1 DUF1128 family protein -
  ACM591_RS05920 (ACM591_05920) - 1312640..1313878 (+) 1239 WP_326026905.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40071.57 Da        Isoelectric Point: 6.4215

>NTDB_id=1105865 ACM591_RS05890 WP_029378980.1 1308097..1309140(+) (vraS) [Staphylococcus sp. Ze2]
MNHYIRAIGSMLILVYSTFFAIFFIDKVFVNVMYFQGMFYTQIFGIPVLLFLNLMVILLCIIVGSVLAYKINQQNHWLKD
QIERSIEGQTVGINDQNIELYNETIELYQTFVPLNQEVHKLRMKTQNLTNESYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMIQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVVDLQKKVPMKVIHDI
EEFKVPKGIEDHLFRITQEAISNTLRHSKGTKVTIELFNRDDYLLLRIQDNGKGFNVDDKVEQSYGLKNMRERALEIGAT
FHIVSLPDAGTRIEVKAPLNKEDSYAD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1105865 ACM591_RS05890 WP_029378980.1 1308097..1309140(+) (vraS) [Staphylococcus sp. Ze2]
ATGAATCACTACATTAGAGCAATAGGTTCGATGTTGATATTAGTTTATAGTACATTTTTTGCTATATTTTTTATTGATAA
AGTATTTGTTAACGTAATGTACTTTCAAGGTATGTTTTATACCCAAATATTTGGTATACCCGTCTTATTATTTTTAAATT
TAATGGTTATTTTGCTCTGTATTATTGTAGGTTCTGTATTAGCTTATAAAATAAACCAACAAAATCATTGGTTAAAAGAC
CAAATAGAAAGATCAATAGAAGGGCAAACTGTAGGTATAAATGATCAAAATATAGAATTGTATAATGAAACCATTGAGTT
ATATCAAACGTTCGTCCCTTTAAATCAAGAAGTACATAAATTAAGGATGAAAACGCAAAATTTAACTAATGAATCATATA
ATATTAATGATGTAAAAGTGAAAAAAATTATTGAAGATGAACGACAAAGGCTAGCACGTGAATTACATGATTCAGTGAGT
CAGCAGTTGTTCGCAGCAAGCATGATGTTATCAGCAATAAAAGAAACAAAATTAGAGGCACCATTAGATCAGCAAATTCC
GGTACTAGAGAAAATGATTCAAGATTCTCAGCTAGAAATGAGAGCTTTATTACTACATTTAAGACCTATAGGATTGAAAG
ATAAATCACTTGGTGAAGGTATTAAAGACTTAGTTGTAGATCTACAGAAAAAAGTACCGATGAAAGTTATACATGATATA
GAAGAATTTAAAGTACCTAAAGGTATTGAAGATCATTTATTTAGAATCACACAAGAAGCTATATCGAATACATTAAGGCA
TTCAAAGGGAACTAAAGTAACTATAGAGTTATTTAATAGAGATGATTATTTATTATTGAGAATACAAGATAATGGTAAAG
GCTTTAATGTTGATGATAAAGTAGAACAAAGTTATGGCTTAAAAAATATGCGTGAGCGTGCACTTGAGATTGGTGCAACG
TTTCATATTGTGTCACTACCTGATGCAGGTACCAGAATTGAAGTTAAAGCCCCATTAAATAAGGAGGATTCATATGCCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

88.184

100

0.882


Multiple sequence alignment