Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACNJYY_RS08030 Genome accession   NZ_CP182294
Coordinates   1473066..1473242 (+) Length   58 a.a.
NCBI ID   WP_416731300.1    Uniprot ID   -
Organism   Fictibacillus sp. JL2B1089     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1468066..1478242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNJYY_RS07990 (ACNJYY_07990) - 1468402..1468857 (+) 456 WP_416731826.1 molybdenum cofactor biosynthesis protein MoaE -
  ACNJYY_RS07995 (ACNJYY_07995) moaD 1468857..1469096 (+) 240 WP_416731827.1 molybdopterin converting factor subunit 1 -
  ACNJYY_RS08000 (ACNJYY_08000) - 1469365..1469658 (-) 294 WP_416731296.1 HNH endonuclease -
  ACNJYY_RS08005 (ACNJYY_08005) - 1469757..1470080 (+) 324 WP_416731297.1 hypothetical protein -
  ACNJYY_RS08010 (ACNJYY_08010) - 1470170..1470349 (+) 180 WP_066393073.1 YjzC family protein -
  ACNJYY_RS08015 (ACNJYY_08015) - 1470389..1470568 (-) 180 WP_066393075.1 YjzD family protein -
  ACNJYY_RS08020 (ACNJYY_08020) - 1470961..1471698 (+) 738 WP_416731298.1 alpha/beta hydrolase -
  ACNJYY_RS08025 (ACNJYY_08025) - 1471812..1472723 (+) 912 WP_416731299.1 NAD-dependent epimerase/dehydratase family protein -
  ACNJYY_RS08030 (ACNJYY_08030) comZ 1473066..1473242 (+) 177 WP_416731300.1 ComZ family protein Regulator
  ACNJYY_RS08035 (ACNJYY_08035) - 1473285..1473584 (-) 300 WP_066393082.1 YppG family protein -
  ACNJYY_RS08040 (ACNJYY_08040) - 1473848..1474780 (+) 933 WP_416731301.1 beta-ketoacyl-ACP synthase III -
  ACNJYY_RS08045 (ACNJYY_08045) fabF 1474825..1476063 (+) 1239 WP_144701151.1 beta-ketoacyl-ACP synthase II -
  ACNJYY_RS08050 (ACNJYY_08050) - 1476201..1476947 (+) 747 WP_066393092.1 YjbA family protein -
  ACNJYY_RS08055 (ACNJYY_08055) trpS 1477039..1478028 (-) 990 WP_416731302.1 tryptophan--tRNA ligase -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6764.93 Da        Isoelectric Point: 4.3178

>NTDB_id=1101013 ACNJYY_RS08030 WP_416731300.1 1473066..1473242(+) (comZ) [Fictibacillus sp. JL2B1089]
MDTERNMKFMQIAMSHMPEAQAFLEKKGIELGMEDVQPMLQLLMNVMNDAYELGKEEK

Nucleotide


Download         Length: 177 bp        

>NTDB_id=1101013 ACNJYY_RS08030 WP_416731300.1 1473066..1473242(+) (comZ) [Fictibacillus sp. JL2B1089]
ATGGATACAGAACGCAACATGAAATTTATGCAGATCGCTATGTCGCATATGCCGGAAGCACAAGCTTTTTTAGAGAAAAA
AGGAATTGAGCTTGGGATGGAAGATGTTCAGCCGATGCTTCAGCTCTTAATGAACGTGATGAATGATGCTTACGAACTTG
GAAAAGAAGAAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

54.545

94.828

0.517

Multiple sequence alignment