Detailed information NTG1090761

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: ACL6EQ_RS07735
• Genome accession: NZ_CP178716
• Coordinates: 1500090..1500869 (+)
• Length: 259 a.a.
• NCBI ID: WP_003220850.1
• Uniprot ID: G4NSM6
• Organism: Bacillus subtilis strain SY1483
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1495090..1505869

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL6EQ_RS07715 (ACL6EQ_07715)	trmFO	1495783..1497090 (+)	1308	WP_003244725.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
ACL6EQ_RS07720 (ACL6EQ_07720)	xerC	1497158..1498072 (+)	915	WP_003231988.1	tyrosine recombinase XerC	-
ACL6EQ_RS07725 (ACL6EQ_07725)	clpQ	1498085..1498630 (+)	546	WP_003238555.1	ATP-dependent protease subunit ClpQ	-
ACL6EQ_RS07730 (ACL6EQ_07730)	hslU	1498647..1500050 (+)	1404	WP_003245556.1	HslU--HslV peptidase ATPase subunit	-
ACL6EQ_RS07735 (ACL6EQ_07735)	codY	1500090..1500869 (+)	780	WP_003220850.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
ACL6EQ_RS07740 (ACL6EQ_07740)	flgB	1501249..1501638 (+)	390	WP_003245656.1	flagellar basal body rod protein FlgB	-
ACL6EQ_RS07745 (ACL6EQ_07745)	flgC	1501638..1502090 (+)	453	WP_003245521.1	flagellar basal body rod protein FlgC	-
ACL6EQ_RS07750 (ACL6EQ_07750)	fliE	1502101..1502421 (+)	321	WP_003238544.1	flagellar hook-basal body complex protein FliE	-
ACL6EQ_RS07755 (ACL6EQ_07755)	fliF	1502467..1504077 (+)	1611	WP_216995765.1	flagellar basal-body MS-ring/collar protein FliF	-
ACL6EQ_RS07760 (ACL6EQ_07760)	fliG	1504090..1505106 (+)	1017	WP_003231981.1	flagellar motor switch protein FliG	-
ACL6EQ_RS07765 (ACL6EQ_07765)	fliH	1505099..1505851 (+)	753	WP_216995763.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29013.22 Da
• Isoelectric Point: 4.6514

>NTDB_id=1090761 ACL6EQ_RS07735 WP_003220850.1 1500090..1500869(+) (codY) [Bacillus subtilis strain SY1483]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTKNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFNDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=1090761 ACL6EQ_RS07735 WP_003220850.1 1500090..1500869(+) (codY) [Bacillus subtilis strain SY1483]
ATGGCTTTATTACAAAAAACAAGAATTATTAACTCCATGCTGCAAGCTGCGGCAGGGAAACCGGTAAACTTCAAGGAAAT
GGCGGAGACGCTGCGGGATGTAATTGATTCCAATATTTTCGTTGTAAGCCGCAGAGGGAAACTCCTTGGGTACTCTATTA
ACCAGCAAATTGAAAATGATCGTATGAAAAAAATGCTTGAGGATCGTCAATTCCCTGAAGAATATACGAAAAATCTGTTT
AATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCA
AGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCACGTTTACAAGATC
AATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCCTAAGAGAAAAAGCAGAA
GAAATTGAAGAGGAAGCAAGAAGCAAAGCTGTCGTACAAATGGCTATCAGCTCGCTTTCTTACAGTGAGCTTGAAGCAAT
TGAGCACATTTTTGAGGAGCTTGACGGAAATGAAGGTCTTCTTGTTGCAAGTAAAATTGCTGACCGTGTCGGCATTACCC
GTTCTGTTATTGTGAACGCACTCAGAAAGCTGGAGAGCGCCGGTGTTATCGAGTCTAGATCATTAGGAATGAAAGGTACT
TATATCAAGGTACTAAACAACAAATTCCTAATTGAATTAGAAAATCTAAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

3D structure

• AlphaFold DB: G4NSM6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	100	100	1
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.451	98.456	0.467