Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACL001_RS10160 | Genome accession | NZ_CP178418 |
| Coordinates | 2139224..2139604 (-) | Length | 126 a.a. |
| NCBI ID | WP_254231386.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain L4796hy | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2134224..2144604
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACL001_RS10130 (ACL001_10130) | tadA | 2134343..2134846 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| ACL001_RS10135 (ACL001_10135) | - | 2134853..2135977 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACL001_RS10140 (ACL001_10140) | ung | 2135974..2136687 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACL001_RS10145 (ACL001_10145) | - | 2136738..2137334 (-) | 597 | WP_000908454.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACL001_RS10150 (ACL001_10150) | gspK | 2137564..2138523 (-) | 960 | WP_000301468.1 | type II secretion system minor pseudopilin GspK | - |
| ACL001_RS10155 (ACL001_10155) | xcpW | 2138523..2139224 (-) | 702 | WP_000594585.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACL001_RS10160 (ACL001_10160) | xcpV | 2139224..2139604 (-) | 381 | WP_254231386.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACL001_RS10165 (ACL001_10165) | - | 2139594..2140148 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACL001_RS10170 (ACL001_10170) | - | 2140158..2140766 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACL001_RS10175 (ACL001_10175) | - | 2140804..2141577 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACL001_RS10180 (ACL001_10180) | - | 2141595..2141936 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACL001_RS10185 (ACL001_10185) | - | 2141948..2142928 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ACL001_RS10190 (ACL001_10190) | kdsB | 2142940..2143701 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13991.24 Da Isoelectric Point: 9.8004
>NTDB_id=1089608 ACL001_RS10160 WP_254231386.1 2139224..2139604(-) (xcpV) [Acinetobacter baumannii strain L4796hy]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYLVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYLVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1089608 ACL001_RS10160 WP_254231386.1 2139224..2139604(-) (xcpV) [Acinetobacter baumannii strain L4796hy]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCTAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCTAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |