Detailed information    

insolico Bioinformatically predicted

Overview


Name   lqsT   Type   Regulator
Locus tag   ACJEHI_RS12945 Genome accession   NZ_CP174230
Coordinates   2883537..2884799 (-) Length   420 a.a.
NCBI ID   WP_010948208.1    Uniprot ID   Q5ZSL1
Organism   Legionella pneumophila strain SPF634     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 2878537..2889799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJEHI_RS12930 (ACJEHI_12930) dupB 2878708..2879901 (+) 1194 WP_010948211.1 Dot/Icm T4SS effector deubiquitinase DupB/LaiF -
  ACJEHI_RS12935 (ACJEHI_12935) sdjA 2879972..2882395 (+) 2424 WP_010948210.1 Dot/Icm T4SS effector SdjA -
  ACJEHI_RS12940 (ACJEHI_12940) - 2882794..2883489 (+) 696 WP_010948209.1 iron-containing redox enzyme family protein -
  ACJEHI_RS12945 (ACJEHI_12945) lqsT 2883537..2884799 (-) 1263 WP_010948208.1 HAMP domain-containing sensor histidine kinase Regulator
  ACJEHI_RS12950 (ACJEHI_12950) mesI 2885196..2886083 (-) 888 WP_010948207.1 Dot/Icm T4SS metaeffector MesI -
  ACJEHI_RS12955 (ACJEHI_12955) ceg32 2886085..2888913 (-) 2829 WP_010948206.1 Dot/Icm T4SS effector Ceg32/SidI -
  ACJEHI_RS12960 (ACJEHI_12960) - 2889221..2889541 (+) 321 WP_010948205.1 hypothetical protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 48657.07 Da        Isoelectric Point: 7.9744

>NTDB_id=1075902 ACJEHI_RS12945 WP_010948208.1 2883537..2884799(-) (lqsT) [Legionella pneumophila strain SPF634]
MQRLKNIFTAIYQYLLKETEDASHQITLFGIVMMINYPLFGVFWKLEHFQLTEEFILRITAALLCACLAFNQFWPRQLLK
FLPVFWYIVLLFCLPYFFAYLTLINNGSTLWLMNCVSAIFFLLLVSSVLGALILLISGVGLAFFHFYILSNNQFVYIPGT
ISLFSLIVTFIAAIIIGALFARDREITYAGRLSGMRMLAGSIAHDLRTPLASIYLQAELQELIVERLNNPEVQKDLKENL
SKITRGIEMSNQLIRMQLNNIQRDKLDTSTFSIYSIKKLLKASLEEYPFKENQKSLIHLNDKNDFSIWIDEVGFKNMMWN
LLKNSLEYIEETHKGEISIWLEQGWEKENFNYLHIKDTAKGLNHKEYEKIFDFFYSGRKEGTGLGLAYCKLLMQAAGGDI
SCKGKKNEFAHFTLKFPKID

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=1075902 ACJEHI_RS12945 WP_010948208.1 2883537..2884799(-) (lqsT) [Legionella pneumophila strain SPF634]
ATGCAAAGGTTAAAAAATATATTTACTGCAATTTACCAATATTTATTAAAAGAAACTGAAGATGCAAGCCACCAAATCAC
TTTATTTGGCATCGTCATGATGATTAATTACCCTCTTTTCGGAGTTTTCTGGAAACTGGAGCATTTTCAACTGACAGAAG
AATTTATTTTACGCATCACTGCAGCCCTCCTCTGTGCCTGTTTGGCATTTAATCAATTTTGGCCAAGACAATTATTAAAA
TTTCTACCTGTTTTTTGGTATATAGTTCTTCTCTTTTGTTTGCCTTACTTTTTTGCTTATTTGACTCTCATAAACAATGG
CTCGACTCTTTGGCTAATGAATTGCGTATCCGCTATCTTTTTTCTTTTATTAGTTTCCAGTGTATTGGGGGCTCTTATAT
TACTTATATCAGGTGTTGGACTTGCTTTTTTTCATTTTTATATTTTATCAAATAATCAGTTTGTCTATATCCCAGGAACC
ATATCACTTTTTAGTTTAATTGTTACGTTTATTGCAGCAATAATCATTGGTGCCTTGTTTGCACGAGATAGAGAAATTAC
CTATGCCGGACGTTTATCGGGTATGCGCATGCTGGCTGGAAGTATCGCTCATGATTTAAGAACGCCGCTTGCCAGTATTT
ATTTACAAGCCGAATTACAGGAATTGATTGTCGAAAGATTAAATAATCCAGAAGTTCAAAAGGACCTGAAGGAAAATTTA
AGCAAAATTACTCGCGGCATAGAAATGAGTAATCAATTAATTCGTATGCAATTAAATAATATTCAACGAGACAAATTAGA
TACCAGTACATTTTCGATTTATTCCATCAAAAAATTGCTCAAGGCGTCTTTAGAAGAATACCCTTTCAAAGAAAATCAAA
AATCATTGATTCATTTAAATGATAAAAATGATTTTTCCATATGGATTGATGAAGTGGGTTTTAAAAATATGATGTGGAAT
TTGCTAAAAAATAGTCTGGAATATATTGAGGAAACCCATAAAGGCGAAATCTCTATCTGGCTAGAACAAGGATGGGAGAA
AGAGAATTTTAATTACCTCCATATAAAAGATACAGCTAAAGGTTTAAATCATAAAGAATATGAAAAAATATTTGATTTCT
TCTATTCTGGCAGAAAAGAAGGAACTGGTTTAGGCTTGGCCTATTGTAAACTTCTGATGCAAGCAGCAGGCGGTGATATT
TCCTGTAAAGGGAAAAAAAATGAATTCGCTCATTTCACTTTAAAATTCCCCAAAATTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5ZSL1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

100

100

1


Multiple sequence alignment