Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ACB359_RS01470 Genome accession   NZ_CP167013
Coordinates   274273..274824 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 16     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 269273..279824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB359_RS01470 (ACB359_01470) comX/sigX/comX2/sigX2 274273..274824 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  ACB359_RS01475 (ACB359_01475) - 275383..275910 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ACB359_RS01480 (ACB359_01480) yqeH 275910..277028 (+) 1119 WP_031488554.1 ribosome biogenesis GTPase YqeH -
  ACB359_RS01485 (ACB359_01485) yhbY 277053..277361 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  ACB359_RS01490 (ACB359_01490) - 277430..278062 (+) 633 WP_031488555.1 nicotinate-nucleotide adenylyltransferase -
  ACB359_RS01495 (ACB359_01495) yqeK 278059..278652 (+) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACB359_RS01500 (ACB359_01500) rsfS 278676..279029 (+) 354 WP_032460821.1 ribosome silencing factor -
  ACB359_RS01505 (ACB359_01505) - 279077..279820 (+) 744 WP_371399858.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=1037522 ACB359_RS01470 WP_010921894.1 274273..274824(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain Isolate 16]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1037522 ACB359_RS01470 WP_010921894.1 274273..274824(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain Isolate 16]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.