NT genes of 'Avibacterium paragallinarum strain ADL-AP16'


In this species, transformation by exogenous DNA is regulated by the presence of a specific Uptake Signal Sequence (USS) (PMID: 17038178).
Evidence:

Gene name Gene type Function Related MGE Organism Genome accession Locus tag Protein ID
insolico comE1/comEA Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS00910 WP_035685388.1
insolico ssb Machinery gene DNA processing Prophage Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS01290 WP_035689249.1
insolico ssb Machinery gene DNA processing Prophage Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS01535 WP_035688057.1
insolico comE Machinery gene DNA binding and uptake Genomic island Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS01665 WP_035688106.1
insolico ssb Machinery gene DNA processing - Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS02110 WP_035687806.1
insolico rec2 Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS06040 WP_081637512.1
insolico ssb Machinery gene DNA processing Prophage Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS06970 WP_035689249.1
insolico pilC Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS07625 WP_081637525.1
insolico pilB Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS07800 WP_035687022.1
insolico pilA Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS07805 WP_035687024.1
insolico dprA Machinery gene DNA processing - Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS08585 WP_035687998.1
insolico comN Machinery gene DNA binding and uptake - Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS08765 WP_017806950.1
insolico comM Machinery gene Involve in natural transformation - Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS09575 WP_035686457.1
insolico recA Machinery gene Homologous recombination IS/Tn Avibacterium paragallinarum strain ADL-AP16 NZ_CP051637 HHJ61_RS11090 WP_035687924.1

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    experimental Experimentally validated     insolico Bioinformatically predicted