 ICEberg ID | 228_CIME |
| Name | CIME368  |
| Family | - |
| Organism | Streptococcus thermophilus CNRZ368 |
| Size (bp) | |
| GC content [Genome] (%) | |
| Insertion site | fda |
| Function | - |
| Species that CIME can be transferred to | - |
| Nucleotide Sequence | AJ278471 (partical CIME sequence) |
The Interaction Network among ICE/IME/CIME | ||||||
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| Detailed Informatioin of the Interaction Network | ||||||
| # | CIME | Inter_Ele [Type] | Methods | Donors | Recipients | Exper_Ref |
| 1 | CIME368 | ICESt2 [ICE] | in cis | Streptococcus thermophilus | Streptococcus thermophilus | 15073287; 26104430 |
| This is an interactioin derived from experimental literature |
The graph information of CIME368 components from AJ278471 | |||||
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| Incomplete gene list of CIME368 from AJ278471 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product | *Reannotation | |
| 1 | - | 1752..2936 [-], 1185 | putative Abi-alpha protein | ||
| 2 | gst | 3491..4708 [+], 1218 | putative glutamate/aspartate-proton symport protein | ||
| 3 | - | 4728..5657 [+], 930 | putative carboxylate-amine/thiol ligase | ||
| 4 | - | 5841..7016 [-], 1176 | putative transposase | ||
| 5 | - | 9382..10515 [-], 1134 | putative ATP/GTP-binding protein | ||
| 6 | - | 10516..11286 [-], 771 | hypothetical protein | ||
| 7 | - | 11316..11339 [-], 24 | ORFV1 protein | ||
| 8 | - | 11774..12199 [+], 426 | hypothetical protein | ||
 Flanking regions |
| (1) Carraro N; Burrus V (2014). Biology of Three ICE Families: SXT/R391, ICEBs1, and ICESt1/ICESt3. Microbiol Spectr. 2(6). [PudMed:26104437] |
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(2) Pavlovic G; Burrus V; Gintz B; Decaris B; Guedon G (2004). Evolution of genomic islands by deletion and tandem accretion by site-specific recombination: ICESt1-related elements from Streptococcus thermophilus. Microbiology. 150(Pt 4):759-74. [PudMed:15073287]
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| experimental literature |