![]() | 70 |
![]() ![]() | ICEEc1 ![]() |
![]() ![]() | ICEO_0000142 |
![]() | Escherichia coli ECOR31 |
![]() | 38927 |
![]() | 47.73 |
![]() | tRNA-Asn |
![]() | Pathogenicity |
![]() | Escherichia coli |
![]() | AY233333 (complete ICE sequence in this GenBank file) |
![]() | - |
![]() | 1..38927 |
![]() ![]() | coordinates: 17702..17825; oriTDB id: 200012 CCGATTAGGCGCGACCAACCCCTTTAAAGCAGCGTTCCCATTTTTTCGAGCTTGCGAAGAAAAAATAGGC TAAACGCGCGTCTTAAAGGGGTTGGTCGCGCGTAGCGTGCGACGGTGTGCCGCC |
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The graph information of ICEEc1 components from AY233333 | |||||
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Complete gene list of ICEEc1 from AY233333 | |||||
# | Gene ![]() | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation ![]() | |
1 | fyuA | 1..2022 [+], 2022 | FyuA | VF | |
2 | - | 6054..6338 [-], 285 | unknown | ||
3 | - | 6362..7072 [+], 711 | Pilx1/VirB1-like protein | VirB1, T4SS component | |
4 | - | 7072..7365 [+], 294 | VirB2-like protein | VirB2, T4SS component | |
5 | - | 7378..10116 [+], 2739 | Pilx3-4/VirB3-4-like protein | VirB4, T4SS component | |
6 | - | 10134..10841 [+], 708 | Pilx5/VirB5-like protein | VirB5, T4SS component | |
7 | - | 10849..11091 [+], 243 | unknown | MagB05, T4SS component | |
8 | - | 11095..12168 [+], 1074 | Pilx6/VirB6-like protein | VirB6, T4SS component | |
9 | - | 12260..12397 [+], 138 | unknown | VirB7, T4SS component | |
10 | - | 12390..13073 [+], 684 | PilX8-VirB8-like protein | VirB8, T4SS component | |
11 | - | 13070..13978 [+], 909 | Pilx9/VirB9-like protein | VirB9, T4SS component | |
12 | - | 14022..15272 [+], 1251 | Pilx10/VirB10-like protein | VirB10, T4SS component | |
13 | - | 15262..16287 [+], 1026 | Pilx11/VirB11-like protein | VirB11, T4SS component | |
14 | - | 16717..17022 [+], 306 | YggA-like protein | ||
15 | - | 17056..17361 [+], 306 | unknown | ||
16 | - | 17472..17774 [+], 303 | unknown | ||
17 | - | 18041..19930 [+], 1890 | MobB-like protein | VirD4, T4SS component | |
18 | - | 19940..20686 [+], 747 | MobC-like protein | ||
19 | - | 20747..23641 [-], 2895 | helicase-like protein | ||
20 | - | 24254..25033 [-], 780 | VrlR-like protein | ||
21 | - | 25337..26284 [-], 948 | antirestriction protein | ||
22 | - | 26817..27848 [+], 1032 | TnpA-like protein | Integrase | |
23 | - | 28380..28640 [+], 261 | unknown | ||
24 | - | 28650..29252 [+], 603 | unknown | ||
25 | - | 29598..30134 [-], 537 | VC0181-like protein | ||
26 | - | 30198..31814 [-], 1617 | VC0180-like protein | ||
27 | - | 31814..33112 [-], 1299 | VC0179-like protein | ||
28 | - | 33112..34197 [-], 1086 | VC0178-like protein | ||
29 | - | 34606..36324 [-], 1719 | unknown | ||
30 | - | 36412..37305 [-], 894 | unknown | ||
31 | - | 37401..38282 [-], 882 | patatin-like protein | ||
32 | - | 38778..39002 [+], 225 | unknown |
(1) Schubert S; Dufke S; Sorsa J; Heesemann J (2004). A novel integrative and conjugative element (ICE) of Escherichia coli: the putative progenitor of the Yersinia high-pathogenicity island. Mol Microbiol. 51(3):837-48. [PubMed:14731283] ![]() |
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