ICEberg
I. Information of ICE
ICEberg ID314
Name ICECdiM68-1 This is a putative ICE identified in this study by Blast
OrganismClostridium difficile M68
Size (bp)18691
GC content [Genome] (%)39.15[28.88]
Insertion siteAT rich regions
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFN668375 (complete ICE sequence in this genome)
Replicon[FN668375]
Genome coordinates334783..353473 
Putative oriT region coordinates: 337944..338073;   oriTDB id:  200001
AACCCCTCGGTATCTAACAGGGGGGTACAAATCGACAGGAAACAGTCAAAAAAACATTAGAAAATCCTTT
GGTTACAAGGGATTTACAAAATTTCAGCGTATGTCAAATGGGCTTTAAAAGTTGACATAC
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICECdiM68-1 is not available.

 

The gene information of ICECdiM68-1 is not available.
ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins0Fasta
Identified as part of this study from FN668375

Genomics & Bioinformatics Group in MML, SJTU