ICEberg ID | 142 |
Name | R392 |
ICEO ID | ICEO_0000600 |
Organism | Providencia rettgeri |
Size (bp) | - |
GC content [Genome] (%) | - |
Insertion site | prfC |
Function | Kanamycin resistance |
Species that ICE can be transferred to | - |
Nucleotide Sequence | AJ634264 (partial ICE sequence) |
Putative oriT region | - |
Putative relaxase | - |
The graph information of R392 components from AJ634264 | |||||
Incomplete gene list of R392 from AJ634264 | |||||
# | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
1 | int | 1..1242 [+], 1242 | putative integrase | Integrase |
Gene may contribute to site-specific recombination |
(1) McGrath BM; O'Halloran JA; Pembroke JT (2005). Pre-exposure to UV irradiation increases the transfer frequency of the IncJ conjugative transposon-like elements R391, R392, R705, R706, R997 and pMERPH and is recA+ dependent. FEMS Microbiol Lett. 243(2):461-5. [PubMed:15686850] |
(2) McGrath BM; Pembroke JT (2004). Detailed analysis of the insertion site of the mobile elements R997, pMERPH, R392, R705 and R391 in E. coli K12. FEMS Microbiol Lett. 237(1):19-26. [PubMed:15268933] |
(3) Coetzee JN; Datta N; Hedges RW (1972). R factors from Proteus rettgeri. J Gen Microbiol. 72(3):543-52. [PubMed:4564689] |
experimental literature |