ICEberg
Browse by ICE    |    Browse by Organism   |    Browse by ICE family
Organism: Vibrio cholerae MJ-1236
#IDICE nameICE familyReplicon
116 experimental ICEVchBan9SXT/R391NC_012668
21067 in_silico ICEVchInd9SXT/R391-
experimental Data derived from experimental literature
in_silico Putative ICEs predicted by bioinformatic methods
The genome map is not available as this strain has not been completely sequenced.
ElementNo. of sequencesDownloadAlignment
ICEs1Fasta-
Proteins93FastaProtein
(1) Lopez-Perez M; Ramon-Marco N; Rodriguez-Valera F (2017). Networking in microbes: conjugative elements and plasmids in the genus Alteromonas. BMC Genomics. 18(1):36. [PudMed:28056800] in_silico
(2) Palmieri C; Magi G; Creti R; Baldassarri L; Imperi M; Gherardi G; Facinelli B (2012). Interspecies mobilization of an erm(T)-carrying plasmid of Streptococcus dysgalactiae subsp. equisimilis by a coresident ICE of the ICESa2603 family. J Antimicrob Chemother. . [PudMed:22949621] experimental
(3) Spagnoletti M; Ceccarelli D; Colombo MM (2012). Rapid detection by multiplex PCR of Genomic Islands, prophages and Integrative Conjugative Elements in V. cholerae 7th pandemic variants. J Microbiol Methods. 88(1):98-102. [PudMed:22062086] experimental
(4) Wozniak RA; Fouts DE; Spagnoletti M; Colombo MM; Ceccarelli D; Garriss G; Dery C; Burrus V; Waldor MK (2009). Comparative ICE genomics: insights into the evolution of the SXT/R391 family of ICEs. PLoS Genet. 5(12):e1000786. [PudMed:20041216] in_silico
 
experimental experimental literature
in_silico in silico analysis literature