ICEberg
Browse by ICE    |    Browse by Organism   |    Browse by ICE family
Organism: Acidithiobacillus caldus s ATCC 51756
#IDICE nameICE familyReplicon
1950 in_silico ICEAcaTY.2-
2952 in_silico ICEAcaTY.1-
in_silico Putative ICEs predicted by bioinformatic methods
-

ElementNo. of sequencesDownloadAlignment
ICEs2Fasta Nucleotide sequence comparison by webACT
Proteins221FastaProtein
(1) Castillo A; Tello M; Ringwald K; Acuna LG; Quatrini R; Orellana O (2017). A DNA segment encoding the anticodon stem/loop of tRNA determines the specific recombination of integrative-conjugative elements in Acidithiobacillus species. RNA Biol. :1-8. [PudMed:29168417]
(2) Acuna LG; Cardenas JP; Covarrubias PC; Haristoy JJ; Flores R; Nunez H; Riadi G; Shmaryahu A; Valdes J; Dopson M; Rawlings DE; Banfield JF; Holmes DS; Quatrini R (2013). Architecture and gene repertoire of the flexible genome of the extreme acidophile Acidithiobacillus caldus. PLoS One. 8(11):e78237. [PudMed:24250794] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature

Genomics & Bioinformatics Group in MML, SJTU