ICEberg
Browse by ICE    |    Browse by Organism   |    Browse by ICE family
Organism: Vibrio cholerae MZO-3
#IDICE nameICE familyReplicon
115 in_silico ICEVchBan8SXT/R391-
in_silico Putative ICEs predicted by bioinformatic methods
The genome map is not available as this strain has not been completely sequenced.
ElementNo. of sequencesDownloadAlignment
ICEs1Fasta-
Proteins111FastaProtein
(1) Taviani E; Spagnoletti M; Ceccarelli D; Haley BJ; Hasan NA; Chen A; Colombo MM; Huq A; Colwell RR (2012). Genomic analysis of ICEVchBan8: An atypical genetic element in Vibrio cholerae. FEBS Lett. 586(11):1617-21. [PudMed:22673571] in_silico
(2) Wozniak RA; Fouts DE; Spagnoletti M; Colombo MM; Ceccarelli D; Garriss G; Dery C; Burrus V; Waldor MK (2009). Comparative ICE genomics: insights into the evolution of the SXT/R391 family of ICEs. PLoS Genet. 5(12):e1000786. [PudMed:20041216] in_silico
 
in_silico in silico analysis literature

Genomics & Bioinformatics Group in MML, SJTU