ICEberg
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ICE family: ICEAPG2
We selected ICEA(PG2) as a reference and defined ICEA(PG2) family. We calssified ICE that has significant sequence alignment and syntenic 'core' structure with ICEA(PG2) into this family.

#IDICE nameStrainReplicon
1229 in_silico ICEA(PG2)Mycoplasma agalactiae PG2NC_009497
2393 in_silico ICEB-1Mycoplasma bovis PG45NC_014760
3420 in_silico ICEMboHb1-1Mycoplasma bovis Hubei-1NC_015725
4444 in_silico ICEBHB0801-1Mycoplasma bovis HB0801NC_018077
in_silico Putative ICEs predicted by bioinformatic methods
(1) Qi J et al. (2012). Comparative geno-plasticity analysis of Mycoplasma bovis HB0801 (Chinese isolate). PLoS One. 7(5):e38239. [PudMed:22693604]
(2) Wise KS et al. (2011). Complete genome sequence of Mycoplasma bovis type strain PG45 (ATCC 25523). Infect Immun. 79(2):982-3. [PudMed:21134966]
(3) Nouvel LX et al. (2010). Comparative genomic and proteomic analyses of two Mycoplasma agalactiae strains: clues to the macro- and micro-events that are shaping mycoplasma diversity. BMC Genomics. 0.518055556. [PudMed:20122262]
 

Genomics & Bioinformatics Group in MML, SJTU