| ICE family: ICEAPG2 | ||||
| We selected ICEA(PG2) as a reference and defined ICEA(PG2) family. We calssified ICE that has significant sequence alignment and syntenic 'core' structure with ICEA(PG2) into this family. | ||||
| # | ID | ICE name | Strain | Replicon |
| 1 | 229  | ICEA(PG2) | Mycoplasma agalactiae PG2 | NC_009497 |
| 2 | 393 | ICEB-1 | Mycoplasma bovis PG45 | NC_014760 |
| 3 | 420 | ICEMboHb1-1 | Mycoplasma bovis Hubei-1 | NC_015725 |
| 4 | 444 | ICEBHB0801-1 | Mycoplasma bovis HB0801 | NC_018077 |
| Putative ICEs predicted by bioinformatic methods | ||||
| Element | No. of sequences | Download | Alignment |
| Proteins | 74 | Fasta | Multiple protein sequence alignment by MUSCLE online |
| ICEs | 4 | Fasta | Nucleotide sequence comparison by webACT |
| (1) Qi J et al. (2012). Comparative geno-plasticity analysis of Mycoplasma bovis HB0801 (Chinese isolate). PLoS One. 7(5):e38239. [PudMed:22693604] |
| (2) Wise KS et al. (2011). Complete genome sequence of Mycoplasma bovis type strain PG45 (ATCC 25523). Infect Immun. 79(2):982-3. [PudMed:21134966] |
| (3) Nouvel LX et al. (2010). Comparative genomic and proteomic analyses of two Mycoplasma agalactiae strains: clues to the macro- and micro-events that are shaping mycoplasma diversity. BMC Genomics. 0.518055556. [PudMed:20122262] |