SecReT4

TraF

TraF is a component of Trb T4SS. TraF is a protease and protein cyclase required for the processing of the pilin subunit of the conjugative pilus into a circular form

Proteins belonging to this kind of component are listed
(You can select < 50 proteins to perform sequence alignment by MUSCLE)

#	Component	Protein ID	T4SS	Accession	Organism
1	TraF	311109748	Trb	NC_014641	Achromobacter xylosoxidans A8
2	TraF	58616680	Trb	NC_006830	Achromobacter xylosoxidans A8 plasmid pA81 (NC_006830)
3	TraF	326402568	Trb	NC_015186	Acidiphilium multivorum AIU301
4	TraF	198282418	Trb	NC_011206	Acidithiobacillus ferrooxidans ATCC 53993
5	TraF	120609387	Trb	NC_008752	Acidovorax citrulli AAC00-1
6	TraF	121582615	Trb	NC_008766	Acidovorax sp. JS42
7	TraF	222109004	Trb	NC_011990	Agrobacterium radiobacter K84
8	TraF	10954759	Trb	NC_002575	Agrobacterium rhizogenes plasmid pRi1724 (NC_002575)
9	TraF	190404422	Trb	NC_010841	Agrobacterium rhizogenes plasmid pRi2659 (NC_010841)
10	TraF	10954930	Trb	NC_002147	Agrobacterium tumefaciens plasmid pTi-SAKURA (NC_002147)
11	TraF	10955040	Trb	NC_002377	Agrobacterium tumefaciens plasmid Ti (NC_002377)
12	TraF	190014836	Trb	NC_010929	Agrobacterium tumefaciens plasmid Ti plasmid pTiBo542 (NC_010929)
13	TraF	16119946	Trb	NC_003065	Agrobacterium tumefaciens str. C58
14	TraF	222083268	Trb	NC_011984	Agrobacterium vitis S4
15	TraF	222080188	Trb	NC_011982	Agrobacterium vitis S4
16	TraF	222109181	Trb	NC_011991	Agrobacterium vitis S4
17	TraF	330824192	Trb	NC_015422	Alicycliphilus denitrificans K601
18	TraF	58616468	Trb	NC_006824	Aromatoleum aromaticum EbN1
19	TraF	158425454	Trb	NC_009937	Azorhizobium caulinodans ORS 571
20	TraF	168998429	Trb	NC_001621	Birmingham IncP-alpha plasmid
21	TraF	116006775	Trb	NC_008459	Bordetella pertussis plasmid pBP136 (NC_008459)
22	TraF	163856500	Trb	NC_010170	Bordetella petrii DSM 12804
23	TraF	27375158	Trb	NC_004463	Bradyrhizobium japonicum USDA 110
24	TraF	148254771	Trb	NC_009485	Bradyrhizobium sp. BTAi1
25	TraF	148258897	Trb	NC_009485	Bradyrhizobium sp. BTAi1
26	TraF	115352039	Trb	NC_008390	Burkholderia ambifaria AMMD
27	TraF	115345505	Trb	NC_008385	Burkholderia ambifaria AMMD
28	TraF	282167241	Trb	NC_013666	Burkholderia cepacia plasmid pIJB1 (NC_013666)
29	TraF	330817387	Trb	NC_015381	Burkholderia gladioli BSR3
30	TraF	237811232	Trb	NC_012695	Burkholderia pseudomallei MSHR346
31	TraF	257091576	Trb	NC_013193	Candidatus Accumulibacter phosphatis clade IIA str. UW-1
32	TraF	295689934	Trb	NC_014100	Caulobacter segnis ATCC 21756
33	TraF	167647782	Trb	NC_010338	Caulobacter sp. K31
34	TraF	167645978	Trb	NC_010338	Caulobacter sp. K31
35	TraF	167646212	Trb	NC_010338	Caulobacter sp. K31
36	TraF	167621816	Trb	NC_010335	Caulobacter sp. K31
37	TraF	167621605	Trb	NC_010333	Caulobacter sp. K31
38	TraF	110634678	Trb	NC_008254	Chelativorans sp. BNC1
39	TraF	110632879	Trb	NC_008254	Chelativorans sp. BNC1
40	TraF	110636169	Trb	NC_008254	Chelativorans sp. BNC1
41	TraF	190572003	Trb	NC_010935	Comamonas testosteroni CNB-1
42	TraF	94310202	Trb	NC_007973	Cupriavidus metallidurans CH34
43	TraF	94310430	Trb	NC_007973	Cupriavidus metallidurans CH34
44	TraF	339329112	Trb	NC_015727	Cupriavidus necator N-1
45	TraF	34500526	Trb	NC_005088	Delftia acidovorans plasmid pUO1 (NC_005088)
46	TraF	160895903	Trb	NC_010002	Delftia acidovorans SPH-1
47	TraF	51246996	Trb	NC_006139	Desulfotalea psychrophila LSv54
48	TraF	242279157	Trb	NC_012881	Desulfovibrio salexigens DSM 2638
49	TraF	307129562	Trb	NC_014500	Dickeya dadantii 3937
50	TraF	10955241	Trb	NC_001735	Enterobacter aerogenes plasmid R751 (NC_001735)
51	TraF	253700973	Trb	NC_012918	Geobacter sp. M21
52	TraF	209544920	Trb	NC_011365	Gluconacetobacter diazotrophicus PAl 5
53	TraF	209543199	Trb	NC_011365	Gluconacetobacter diazotrophicus PAl 5
54	TraF	209543148	Trb	NC_011365	Gluconacetobacter diazotrophicus PAl 5
55	TraF	261856205	Trb	NC_013422	Halothiobacillus neapolitanus c2
56	TraF	254293054	Trb	NC_012982	Hirschia baltica ATCC 49814
57	TraF	77993259	Trb	NC_007502	IncP-1beta multiresistance plasmid pB8
58	TraF	111038095	Trb	NC_008272	IncP-1 plasmid pKJK5
59	TraF	310639224	Trb	NC_014621	Ketogulonicigenium vulgare Y25
60	TraF	289166218	Trb	NC_013861	Legionella longbeachae NSW150
61	TraF	296105670	Trb	NC_014125	Legionella pneumophila 2300/99 Alcoy
62	TraF	296106096	Trb	NC_014125	Legionella pneumophila 2300/99 Alcoy
63	TraF	148360840	Trb	NC_009494	Legionella pneumophila str. Corby
64	TraF	148358320	Trb	NC_009494	Legionella pneumophila str. Corby
65	TraF	319785200	Trb	NC_014923	Mesorhizobium ciceri biovar biserrulae WSM1271
66	TraF	13488569	Trb	NC_002682	Mesorhizobium loti MAFF303099
67	TraF	337267281	Trb	NC_015675	Mesorhizobium opportunistum WSM2075
68	TraF	188582325	Trb	NC_010725	Methylobacterium populi BJ001
69	TraF	295788855	Trb	NC_014105	Neisseria gonorrhoeae plasmid pEP5289 (NC_014105)
70	TraF	92109665	Trb	NC_007961	Nitrobacter hamburgensis X14
71	TraF	114326603	Trb	NC_008341	Nitrosomonas eutropha C91
72	TraF	325983765	Trb	NC_015223	Nitrosomonas sp. AL212 plasmid pNAL21201 (NC_015223)
73	TraF	325980855	Trb	NC_015221	Nitrosomonas sp. AL212 plasmid pNAL21202 (NC_015221)
74	TraF	334139843	Trb	NC_015580	Novosphingobium sp. PP1Y
75	TraF	153010512	Trb	NC_009668	Ochrobactrum anthropi ATCC 49188
76	TraF	337739228	Trb	NC_015689	Oligotropha carboxidovorans OM5
77	TraF	337739557	Trb	NC_015684	Oligotropha carboxidovorans OM5
78	TraF	337740828	Trb	NC_015684	Oligotropha carboxidovorans OM5
79	TraF	209883356	Trb	NC_011386	Oligotropha carboxidovorans OM5
80	TraF	209885569	Trb	NC_011386	Oligotropha carboxidovorans OM5
81	TraF	119384250	Trb	NC_008686	Paracoccus denitrificans PD1222
82	TraF	119382893	Trb	NC_008686	Paracoccus denitrificans PD1222
83	TraF	119385905	Trb	NC_008687	Paracoccus denitrificans PD1222
84	TraF	154252269	Trb	NC_009719	Parvibaculum lavamentivorans DS-1
85	TraF	304322040	Trb	NC_014414	Parvularcula bermudensis HTCC2503
86	TraF	304320300	Trb	NC_014414	Parvularcula bermudensis HTCC2503
87	TraF	197104969	Trb	NC_011144	Phenylobacterium zucineum HLK1
88	TraF	253723647	Trb	NC_012919	Photobacterium damselae subsp. piscicida plasmid pP9014 (NC_012919)
89	TraF	54303287	Trb	NC_006371	Photobacterium profundum SS9
90	TraF	55418043	Trb	NC_006388	Plasmid pB3
91	TraF	108524645	Trb	NC_008055	Plasmid QKH54
92	TraF	121605426	Trb	NC_008781	Polaromonas naphthalenivorans CJ2
93	TraF	194335121	Trb	NC_011061	Prosthecochloris aestuarii DSM 271
94	TraF	194334526	Trb	NC_011059	Prosthecochloris aestuarii DSM 271
95	TraF	114881176	Trb	NC_008357	Pseudomonas aeruginosa plasmid pBS228 (NC_008357)
96	TraF	116050535	Trb	NC_008463	Pseudomonas aeruginosa UCBPP-PA14
97	TraF	333900337	Trb	NC_015556	Pseudomonas fulva 12-X
98	TraF	330503802	Trb	NC_015410	Pseudomonas mendocina NK-01
99	TraF	257070311	Trb	NC_013176	Pseudomonas putida plasmid pW2 (NC_013176)
100	TraF	32455809	Trb	NC_004956	Pseudomonas sp. ADP plasmid pADP-1 (NC_004956)
101	TraF	72384326	Trb	NC_007337	Ralstonia eutropha JMP134
102	TraF	49176942	Trb	NC_005912	Ralstonia eutropha JMP134 plasmid pJP4 (NC_005912)
103	TraF	17547321	Trb	NC_003295	Ralstonia solanacearum GMI1000
104	TraF	86359858	Trb	NC_007762	Rhizobium etli CFN 42
105	TraF	241518252	Trb	NC_012853	Rhizobium leguminosarum bv. trifolii WSM1325
106	TraF	116255182	Trb	NC_008383	Rhizobium leguminosarum bv. viciae 3841
107	TraF	115526025	Trb	NC_008435	Rhodopseudomonas palustris BisA53
108	TraF	90425044	Trb	NC_007925	Rhodopseudomonas palustris BisB18
109	TraF	90425381	Trb	NC_007925	Rhodopseudomonas palustris BisB18
110	TraF	160873123	Trb	NC_010000	Shewanella baltica OS195
111	TraF	117919715	Trb	NC_008577	Shewanella sp. ANA-3
112	TraF	16519707	Trb	NC_000914	Sinorhizobium fredii NGR234
113	TraF	150377498	Trb	NC_009621	Sinorhizobium medicae WSM419
114	TraF	190410119	Trb	NC_010865	Sinorhizobium meliloti SM11 plasmid pSmeSM11b (NC_010865)
115	TraF	294011992	Trb	NC_014006	Sphingobium japonicum UT26S
116	TraF	294023840	Trb	NC_014007	Sphingobium japonicum UT26S
117	TraF	294012966	Trb	NC_014006	Sphingobium japonicum UT26S
118	TraF	347529000	Trb	NC_015976	Sphingobium sp. SYK-6
119	TraF	347529431	Trb	NC_015976	Sphingobium sp. SYK-6
120	TraF	73746021	Trb	NC_007353	Sphingomonas sp. A1 plasmid pA1 (NC_007353)
121	TraF	148556587	Trb	NC_009511	Sphingomonas wittichii RW1
122	TraF	148553109	Trb	NC_009511	Sphingomonas wittichii RW1
123	TraF	103487972	Trb	NC_008048	Sphingopyxis alaskensis RB2256
124	TraF	103488100	Trb	NC_008048	Sphingopyxis alaskensis RB2256
125	TraF	190573325	Trb	NC_010943	Stenotrophomonas maltophilia K279a
126	TraF	220935051	Trb	NC_011901	Thioalkalivibrio sulfidophilus HL-EbGr7
127	TraF	296136425	Trb	NC_014153	Thiomonas intermedia K12
128	TraF	31795144	Trb	NC_004840	uncultured bacterium plasmid pB10 (NC_004840)
129	TraF	19352410	Trb	NC_003430	uncultured bacterium plasmid pB4 (NC_003430)
130	TraF	53793955	Trb	NC_006352	uncultured bacterium plasmid pTB11 (NC_006352)
131	TraF	84310725	Trb	NC_007680	uncultured bacterium plasmid pTP6 (NC_007680)
132	TraF	154244707	Trb	NC_009720	Xanthobacter autotrophicus Py2
133	TraF	154244540	Trb	NC_009720	Xanthobacter autotrophicus Py2
134	TraF	154244657	Trb	NC_009720	Xanthobacter autotrophicus Py2
135	TraF	154246809	Trb	NC_009720	Xanthobacter autotrophicus Py2
136	TraF	154246940	Trb	NC_009720	Xanthobacter autotrophicus Py2
137	TraF	154247932	Trb	NC_009720	Xanthobacter autotrophicus Py2
138	TraF	15838650	Trb	NC_002488	Xylella fastidiosa 9a5c
139	TraF	182682755	Trb	NC_010579	Xylella fastidiosa M23
140	TraF	153930620	Trb	NC_009704	Yersinia pseudotuberculosis IP 31758
141	TraF	260753577	Trb	NC_013355	Zymomonas mobilis subsp. mobilis NCIMB 11163
	Select All

Multiple protein sequence alignment by MUSCLE online

Genomics & Bioinformatics Group in MML, SJTU

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