SecReT4

T4SS
References

T4SS ID	458
Strain	Desulfotalea psychrophila LSv54
Replicon	plasmid large [Browse all T4SS(s) in this replicon]
Accession	NC_006139
Location	12879..27307
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	0	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	0	1	2

The information of T4SS components from NC_006139

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	DPPB06	8746..9126 [+], 381	51246977	hypothetical protein
2	DPPB07	10291..10563 [+], 273	51246978	hypothetical protein
3	DPPB08	10597..10692 [+], 96	51246979	hypothetical protein
4	DPPB09	11415..11762 [+], 348	51246980	hypothetical protein
5	DPPB10	11780..12490 [+], 711	51246981	conjugal transfer protein TraL
6	DPPB11	12491..12871 [+], 381	51246982	hypothetical protein
7	DPPB12	12879..13820 [+], 942	51246983	conjugal transfer protein TrbB	TrbB
8	DPPB13	13830..14156 [+], 327	51246984	conjugal transfer protein TrbC	TrbC
9	DPPB14	14157..16871 [+], 2715	51246985	conjugal transfer protein TrbE	TrbE
10	DPPB15	16825..17688 [+], 864	51246986	conjugal transfer protein TrbJ	TrbJ
11	DPPB16	17813..19246 [+], 1434	51246987	conjugal transfer protein TrbL	TrbL
12	DPPB17	19288..19953 [+], 666	51246988	conjugal transfer protein TrbF	TrbF
13	DPPB18	19963..20949 [+], 987	51246989	conjugal transfer protein TrbG	TrbG
14	DPPB19	20950..21387 [+], 438	51246990	hypothetical protein
15	DPPB20	21388..22635 [+], 1248	51246991	conjugal transfer protein TrbI	TrbI
16	DPPB21	22610..22900 [+], 291	51246992	hypothetical protein
17	DPPB22	22900..24981 [+], 2082	51246993	related to DNA primase TraC
18	DPPB23	24978..26411 [+], 1434	51246994	TraG protein, N-terminal part	TraG
19	DPPB24	26445..26861 [+], 417	51246995	TraG protein, C-terminal part	TraG
20	DPPB25	26858..27307 [+], 450	51246996	conjugal transfer protein TraF precursor	TraF
21	DPPB26	27377..27667 [+], 291	51246997	related to TrbM protein (partial length)
22	DPPB27	28199..28477 [-], 279	51246998	hypothetical protein
23	DPPB28	29027..30739 [+], 1713	51246999	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_006139