SecReT4

T4SS
References

T4SS ID	48
Strain	uncultured bacterium plasmid pTB11 (NC_006352)
Replicon	plasmid pTB11 [Browse all T4SS(s) in this replicon]
Accession	NC_006352
Location	15087..26857; 50317..52754
Name	Trb
Function	Conjugation
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	1	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	1	1	1	1	1

The information of T4SS components from NC_006352
Region 1: 15087..26857

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pTB11p09 (pinR-like)	10770..11390 [+], 621	53793910	invertase/recombinase-like protein
2	pTB11p10	11486..11965 [+], 480	53793911	hypothetical protein
3	pTB11p11	12121..12627 [-], 507	53793912	hypothetical protein
4	pTB11p12 (trfA1)	12783..13931 [-], 1149	53793913	transcriptional repressor protein
5	pTB11p13 (ssb)	13980..14330 [-], 351	53793914	single-strand DNA-binding protein
6	pTB11p14 (trbA)	14505..14816 [+], 312	53793915	conjugal transfer protein TrbA
7	pTB11p15 (trbB)	15087..16046 [+], 960	53793916	conjugal transfer ATPase TrbB	TrbB
8	pTB11p16 (trbC)	16059..16496 [+], 438	53793917	conjugal transfer protein TrbC	TrbC
9	pTB11p17 (trbD)	16499..16810 [+], 312	53793918	conjugal transfer protein TrbD	TrbD
10	pTB11p18 (trbE)	16807..19365 [+], 2559	53793919	conjugal transfer protein TrbE	TrbE
11	pTB11p19 (trbF)	19362..20120 [+], 759	53793920	conjugal transfer protein TrbF	TrbF
12	pTB11p20 (trbG)	20132..21025 [+], 894	53793921	conjugal transfer protein TrbG	TrbG
13	pTB11p21 (trbH)	21029..21511 [+], 483	53793922	conjugal transfer protein TrbH	TrbH
14	pTB11p22 (trbI)	21516..22907 [+], 1392	53793923	conjugal transfer protein TrbI	TrbI
15	pTB11p23 (trbJ)	22924..23700 [+], 777	53793924	conjugal transfer protein TrbJ	TrbJ
16	pTB11p24 (trbK)	23712..23921 [+], 210	53793925	entry exclusion protein	TrbK
17	pTB11p25 (trbL)	23928..25514 [+], 1587	53793926	TrbL protein	TrbL
18	pTB11p26 (trbM)	25538..26137 [+], 600	53793927	conjugal transfer protein TrbM
19	pTB11p27 (trbN)	26153..26857 [+], 705	53793928	conjugal transfer protein TrbN	TrbN
20	pTB11p28 (trbO)	26888..27151 [+], 264	53793929	TrbO protein
21	pTB11p29 (trbP)	27188..27922 [+], 735	53793930	conjugal transfer protein TrbP
22	pTB11p30 (upf31.7)	27939..28358 [+], 420	53793931	hypothetical protein
23	pTB11p31 (fiwA)	28373..29068 [+], 696	53793932	FiwA protein
24	pTB11p32 (upf32.8)	29104..29766 [+], 663	53793933	hypothetical protein
25	pTB11p33 (parA1)	29790..30449 [-], 660	53793934	site-specific recombinase/resolvase
26	pTB11p34 (parB)	30410..30943 [-], 534	53793935	nuclease
27	pTB11p35 (parC)	30940..31200 [-], 261	53793936	ParC protein

Region 2: 50317..52754

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pTB11p52 (traD)	47820..48083 [-], 264	53793953	TraD protein
2	pTB11p53 (traE)	48089..50302 [-], 2214	53793954	DNA topoisimerase
3	pTB11p54 (traF)	50317..50850 [-], 534	53793955	conjugal transfer peptidase TraF	TraF
4	pTB11p55 (traG)	50847..52754 [-], 1908	53793956	conjugal transfer coupling protein TraG	TraG
5	pTB11p56 (traI)	52751..54949 [-], 2199	53793957	conjugal transfer relaxase TraI
6	pTB11p57 (traH)	53050..53409 [-], 360	53793958	TraH protein
7	pTB11p58 (traJ)	54984..55355 [-], 372	53793959	conjugal transfer relaxosome component TraJ
8	pTB11p59 (traK)	55723..56127 [+], 405	53793960	oriT-binding protein TraK
9	pTB11p60 (traL)	56127..56852 [+], 726	53793961	conjugal transfer protein TraL
10	pTB11p61 (traM)	56849..57286 [+], 438	53793962	conjugal transfer protein TraM

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Tennstedt T; Szczepanowski R; Krahn I; Puhler A; Schluter A (2005). Sequence of the 68,869 bp IncP-1alpha plasmid pTB11 from a waste-water treatment plant reveals a highly conserved backbone, a Tn402-like integron and other transposable elements. Plasmid. 53(3):218-38. [PudMed:15848226]