Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) ataRT/DUF1778(antitoxin)
Location 918802..919556 Replicon chromosome
Accession NZ_CP026604
Organism Catenovulum sp. CCB-QB4

Toxin (Protein)


Gene name ataT Uniprot ID -
Locus tag C2869_RS03400 Protein ID WP_108601613.1
Coordinates 918802..919299 (-) Length 166 a.a.

Antitoxin (Protein)


Gene name ataR Uniprot ID -
Locus tag C2869_RS03405 Protein ID WP_108601614.1
Coordinates 919290..919556 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C2869_RS03390 917245..918246 - 1002 WP_108601611.1 Fic family protein -
C2869_RS03400 918802..919299 - 498 WP_108601613.1 GNAT family N-acetyltransferase Toxin
C2869_RS03405 919290..919556 - 267 WP_108601614.1 DUF1778 domain-containing protein Antitoxin
C2869_RS03410 920013..921716 + 1704 WP_108601615.1 glycoside hydrolase family 88 protein -
C2869_RS03415 921837..923051 - 1215 WP_108601616.1 glycoside hydrolase family 27 protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(43-145)

Antitoxin

Vibrio phage ICP1, Orf50

(2-88)


Sequences

Toxin        


Download         Length: 166 a.a.        Molecular weight: 18249.07 Da        Isoelectric Point: 9.3243

>T95246 WP_108601613.1 NZ_CP026604:c919299-918802 [Catenovulum sp. CCB-QB4]
VGITAPRLLSEQHNLGYFNCGNRDLDEWLTKKAYKSQKRNHTKVYVVADENHQVIGYYAIAMGSVRREDAISPLRRNSPN
PIPMVVLARLGVHSDYQGYGIGAGLLKDCVLRSVHAMDVIGGAGILVHAIDASAKQFYQRFGFVESPFSPMTLMARICDI
KVSIA

Download         Length: 498 bp

>T95246 NZ_CP026604:c919299-918802 [Catenovulum sp. CCB-QB4]
GTGGGAATAACAGCTCCCAGATTACTATCTGAACAACATAATCTTGGTTACTTTAACTGCGGTAATCGTGACCTTGATGA
GTGGTTAACTAAAAAAGCGTATAAGAGCCAAAAACGCAATCACACAAAAGTTTATGTTGTAGCTGATGAAAATCATCAAG
TCATTGGTTATTACGCAATAGCGATGGGCTCAGTGCGGCGAGAAGATGCAATAAGCCCGCTGAGAAGGAATAGCCCAAAC
CCGATACCTATGGTTGTACTTGCGCGACTTGGTGTTCACTCTGATTATCAAGGATATGGAATTGGTGCTGGCTTGCTTAA
AGATTGTGTCCTTCGCTCGGTTCATGCTATGGACGTTATCGGTGGTGCGGGTATTTTGGTCCATGCAATTGACGCATCAG
CTAAGCAGTTTTATCAACGCTTTGGCTTTGTTGAATCGCCGTTTTCTCCAATGACACTGATGGCTAGAATTTGTGATATA
AAAGTGTCTATAGCCTAA

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9710.03 Da        Isoelectric Point: 4.3867

>AT95246 WP_108601614.1 NZ_CP026604:c919556-919290 [Catenovulum sp. CCB-QB4]
MATKTAPINMRVEPSVRNILDAAASILKVDRTVFIQQAALAEAYEVLANQKDFTLDEQAFAAFEQALDATPTRNEGMADL
LSRKAPWE

Download         Length: 267 bp

>AT95246 NZ_CP026604:c919556-919290 [Catenovulum sp. CCB-QB4]
ATGGCGACTAAAACAGCCCCCATTAATATGCGTGTAGAGCCTTCTGTTCGTAATATATTGGATGCCGCGGCGAGTATATT
AAAAGTTGATAGAACGGTATTTATCCAACAAGCTGCACTAGCAGAGGCTTACGAAGTCTTAGCTAACCAAAAAGATTTTA
CGCTGGATGAACAAGCCTTTGCAGCATTTGAGCAAGCGTTGGATGCTACACCAACTAGAAACGAAGGGATGGCAGATTTA
CTGAGTAGGAAGGCTCCGTGGGAATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References