Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 190042..190678 Replicon chromosome
Accession NZ_CP026420
Organism Acinetobacter sp. ACNIH1

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag C3F22_RS01035 Protein ID WP_104425690.1
Coordinates 190292..190678 (+) Length 129 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID -
Locus tag C3F22_RS01030 Protein ID WP_034590267.1
Coordinates 190042..190299 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C3F22_RS01010 185543..186550 + 1008 WP_004786889.1 DNA-directed RNA polymerase subunit alpha -
C3F22_RS01015 186569..186934 + 366 WP_004786886.1 50S ribosomal protein L17 -
C3F22_RS01020 187143..188633 + 1491 WP_104425688.1 NAD(P)/FAD-dependent oxidoreductase -
C3F22_RS01025 188687..189859 - 1173 WP_104425689.1 acyl-CoA dehydrogenase family protein -
C3F22_RS01030 190042..190299 + 258 WP_034590267.1 succinate dehydrogenase assembly factor 2 Antitoxin
C3F22_RS01035 190292..190678 + 387 WP_104425690.1 hypothetical protein Toxin
C3F22_RS01040 191224..192264 + 1041 WP_004786877.1 hypothetical protein -
C3F22_RS01045 192337..192909 + 573 WP_104425691.1 rhombosortase -
C3F22_RS01050 193087..195369 + 2283 WP_104425692.1 TRAP transporter large permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-80)


Sequences

Toxin        


Download         Length: 129 a.a.        Molecular weight: 15178.30 Da        Isoelectric Point: 10.0347

>T94848 WP_104425690.1 NZ_CP026420:190292-190678 [Acinetobacter sp. ACNIH1]
MDNRCFKLKRSKCALVFQLFIFAVLMFLLYQLLPMAIWLVCGVIGLVIYQLFYRKTPHIEQFEYLDGREWSLTAAAQGTR
RVLISHVIDHQAYIVVYFQHAKARPLLIWCDQLPFKQWKSLKVLTKIL

Download         Length: 387 bp

>T94848 NZ_CP026420:190292-190678 [Acinetobacter sp. ACNIH1]
ATGGATAATCGTTGTTTCAAGCTGAAACGCAGCAAGTGTGCGCTGGTGTTTCAGCTTTTTATTTTTGCTGTATTGATGTT
TCTGCTGTATCAGTTATTGCCTATGGCGATTTGGCTGGTTTGTGGTGTCATCGGATTGGTCATCTACCAGTTGTTTTATC
GTAAGACACCGCACATTGAGCAGTTTGAATATCTGGATGGACGTGAATGGTCGCTGACAGCAGCTGCGCAAGGCACACGG
CGAGTGTTGATCAGTCACGTGATTGATCACCAAGCTTATATCGTGGTGTATTTCCAGCATGCAAAAGCACGTCCGTTGCT
CATCTGGTGTGACCAGTTGCCTTTTAAACAATGGAAGTCTTTGAAAGTTTTGACAAAAATACTTTAA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10295.82 Da        Isoelectric Point: 4.5626

>AT94848 WP_034590267.1 NZ_CP026420:190042-190299 [Acinetobacter sp. ACNIH1]
MTDDITLEERKVIYRARRGLKEIDVYFDPYVKNYYLTADPFEKQMFAELVAQEDPDLLDWFMEVSEPPRPELKDFIKKLK
FYVHG

Download         Length: 258 bp

>AT94848 NZ_CP026420:190042-190299 [Acinetobacter sp. ACNIH1]
ATGACTGATGACATCACCTTAGAAGAGCGCAAAGTGATTTATCGCGCGCGTCGTGGCTTGAAAGAGATCGATGTATATTT
TGATCCCTACGTGAAAAACTATTATCTCACTGCTGATCCCTTCGAAAAACAGATGTTTGCTGAGCTGGTTGCACAGGAAG
ATCCAGACCTGCTGGACTGGTTTATGGAAGTGTCTGAACCCCCACGCCCTGAATTAAAAGATTTTATCAAGAAGCTTAAA
TTTTACGTTCATGGATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References