Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | BrnTA/BrnT-BrnA |
Location | 2862682..2863256 | Replicon | chromosome |
Accession | NZ_CP026265 | ||
Organism | Aminobacter sp. MSH1 |
Toxin (Protein)
Gene name | brnT | Uniprot ID | - |
Locus tag | CO731_RS14115 | Protein ID | WP_108607656.1 |
Coordinates | 2862993..2863256 (-) | Length | 88 a.a. |
Antitoxin (Protein)
Gene name | brnA | Uniprot ID | - |
Locus tag | CO731_RS14110 | Protein ID | WP_108607655.1 |
Coordinates | 2862682..2862996 (-) | Length | 105 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CO731_RS14100 | 2858126..2858581 | + | 456 | WP_108607653.1 | GNAT family N-acetyltransferase | - |
CO731_RS14105 | 2858719..2862654 | + | 3936 | WP_108607654.1 | AsmA family protein | - |
CO731_RS14110 | 2862682..2862996 | - | 315 | WP_108607655.1 | BrnA antitoxin family protein | Antitoxin |
CO731_RS14115 | 2862993..2863256 | - | 264 | WP_108607656.1 | BrnT family toxin | Toxin |
CO731_RS14120 | 2863346..2863582 | - | 237 | WP_108607657.1 | ribbon-helix-helix domain-containing protein | - |
CO731_RS14125 | 2863579..2863776 | - | 198 | WP_108607658.1 | DUF4169 family protein | - |
CO731_RS14130 | 2863795..2864334 | - | 540 | WP_108607659.1 | SspB family protein | - |
CO731_RS14135 | 2864425..2865084 | - | 660 | WP_108607660.1 | TetR/AcrR family transcriptional regulator | - |
CO731_RS14140 | 2865254..2866462 | + | 1209 | WP_108607661.1 | multidrug effflux MFS transporter | - |
CO731_RS14145 | 2866658..2867800 | + | 1143 | WP_159091640.1 | GGDEF domain-containing protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 88 a.a. Molecular weight: 9858.43 Da Isoelectric Point: 10.5537
>T93754 WP_108607656.1 NZ_CP026265:c2863256-2862993 [Aminobacter sp. MSH1]
MKIVWDEPKRLANLEKHGFDFADVVFFGWESAVIKPARPDNAGRRRMKAIGYFDNRVAVVIFTTLGTEAMSVISFRPASA
QERKVLS
MKIVWDEPKRLANLEKHGFDFADVVFFGWESAVIKPARPDNAGRRRMKAIGYFDNRVAVVIFTTLGTEAMSVISFRPASA
QERKVLS
Download Length: 264 bp
>T93754 NZ_CP026265:c2863256-2862993 [Aminobacter sp. MSH1]
ATGAAGATCGTCTGGGACGAACCAAAGCGTCTGGCCAATCTCGAAAAGCACGGCTTCGACTTCGCTGACGTAGTGTTTTT
CGGCTGGGAGTCTGCTGTCATCAAACCTGCCCGGCCAGACAACGCCGGTCGTCGACGAATGAAGGCAATCGGCTACTTCG
ACAATCGGGTCGCCGTGGTGATCTTCACCACACTGGGCACGGAAGCGATGTCCGTCATCAGCTTCAGGCCAGCAAGCGCT
CAGGAAAGGAAGGTTCTGTCATGA
ATGAAGATCGTCTGGGACGAACCAAAGCGTCTGGCCAATCTCGAAAAGCACGGCTTCGACTTCGCTGACGTAGTGTTTTT
CGGCTGGGAGTCTGCTGTCATCAAACCTGCCCGGCCAGACAACGCCGGTCGTCGACGAATGAAGGCAATCGGCTACTTCG
ACAATCGGGTCGCCGTGGTGATCTTCACCACACTGGGCACGGAAGCGATGTCCGTCATCAGCTTCAGGCCAGCAAGCGCT
CAGGAAAGGAAGGTTCTGTCATGA
Antitoxin
Download Length: 105 a.a. Molecular weight: 11649.25 Da Isoelectric Point: 8.5537
>AT93754 WP_108607655.1 NZ_CP026265:c2862996-2862682 [Aminobacter sp. MSH1]
MTGKTLKKAFEPGHGYTKEDWDAVDSPELTEEELAQFRPAQEVLPPEFFQGIEEARRARGRPSVEAPKQVVSIRLDPDVI
AKFKATGKGWQSRINDVLKKAKVG
MTGKTLKKAFEPGHGYTKEDWDAVDSPELTEEELAQFRPAQEVLPPEFFQGIEEARRARGRPSVEAPKQVVSIRLDPDVI
AKFKATGKGWQSRINDVLKKAKVG
Download Length: 315 bp
>AT93754 NZ_CP026265:c2862996-2862682 [Aminobacter sp. MSH1]
ATGACCGGCAAGACACTGAAAAAGGCGTTCGAACCTGGACACGGCTACACCAAGGAAGATTGGGATGCCGTGGACAGCCC
GGAACTGACTGAGGAAGAACTGGCCCAATTTCGCCCGGCTCAGGAAGTCTTGCCGCCAGAATTCTTCCAAGGCATCGAAG
AAGCACGCCGCGCTCGTGGCCGCCCCTCAGTCGAGGCGCCCAAGCAGGTCGTCTCGATTCGCCTCGATCCCGATGTCATC
GCCAAGTTCAAGGCCACCGGCAAAGGCTGGCAAAGCCGTATCAACGACGTCCTGAAAAAGGCCAAGGTCGGCTGA
ATGACCGGCAAGACACTGAAAAAGGCGTTCGAACCTGGACACGGCTACACCAAGGAAGATTGGGATGCCGTGGACAGCCC
GGAACTGACTGAGGAAGAACTGGCCCAATTTCGCCCGGCTCAGGAAGTCTTGCCGCCAGAATTCTTCCAAGGCATCGAAG
AAGCACGCCGCGCTCGTGGCCGCCCCTCAGTCGAGGCGCCCAAGCAGGTCGTCTCGATTCGCCTCGATCCCGATGTCATC
GCCAAGTTCAAGGCCACCGGCAAAGGCTGGCAAAGCCGTATCAACGACGTCCTGAAAAAGGCCAAGGTCGGCTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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