Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) vapBC/VapC-StbC
Location 4091080..4091750 Replicon chromosome
Accession NZ_CP026124
Organism Achromobacter sp. AONIH1

Toxin (Protein)


Gene name vapC Uniprot ID -
Locus tag C2U31_RS18810 Protein ID WP_103274163.1
Coordinates 4091080..4091499 (-) Length 140 a.a.

Antitoxin (Protein)


Gene name vapB Uniprot ID -
Locus tag C2U31_RS18815 Protein ID WP_103274164.1
Coordinates 4091496..4091750 (-) Length 85 a.a.

Genomic Context

C2U31_RS18790C2U31_RS18825C2U31_RS18830C2U31_RS18785C2U31_RS18795C2U31_RS18800C2U31_RS18805C2U31_RS18810C2U31_RS18815C2U31_RS18820C2U31_RS18835
Location: 4087929..4088186 (258 bp)
Type: Others
Protein ID: WP_103276445.1
Location: 4092800..4094611 (1812 bp)
Type: Others
Protein ID: WP_103274166.1
Location: 4094778..4095698 (921 bp)
Type: Others
Protein ID: WP_103274167.1
Location: 4086745..4087611 (867 bp)
Type: Others
Protein ID: WP_158658402.1
Location: 4088173..4088859 (687 bp)
Type: Others
Protein ID: WP_103276446.1
Location: 4089086..4089493 (408 bp)
Type: Others
Protein ID: WP_103274161.1
Location: 4089665..4091053 (1389 bp)
Type: Others
Protein ID: WP_103274162.1
Location: 4091080..4091499 (420 bp)
Type: Toxin
Protein ID: WP_103274163.1
Location: 4091496..4091750 (255 bp)
Type: Antitoxin
Protein ID: WP_103274164.1
Location: 4091855..4092628 (774 bp)
Type: Others
Protein ID: WP_103274165.1
Location: 4095711..4096583 (873 bp)
Type: Others
Protein ID: WP_199770851.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
C2U31_RS187854086745..4087611-867WP_158658402.1hypothetical protein-
C2U31_RS187904087929..4088186+258WP_103276445.1hypothetical protein-
C2U31_RS187954088173..4088859-687WP_103276446.1class I SAM-dependent methyltransferase-
C2U31_RS188004089086..4089493-408WP_103274161.1DoxX family protein-
C2U31_RS188054089665..4091053-1389WP_103274162.1ATP-dependent RNA helicase DbpA-
C2U31_RS188104091080..4091499-420WP_103274163.1PIN domain-containing proteinToxin
C2U31_RS188154091496..4091750-255WP_103274164.1plasmid stabilization proteinAntitoxin
C2U31_RS188204091855..4092628-774WP_103274165.1IclR family transcriptional regulator-
C2U31_RS188254092800..4094611+1812WP_103274166.1sulfoacetaldehyde acetyltransferase-
C2U31_RS188304094778..4095698+921WP_103274167.1bifunctional enoyl-CoA hydratase/phosphate acetyltransferase-
C2U31_RS188354095711..4096583-873WP_199770851.1DUF4240 domain-containing protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

PIN domain

(2-123)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 140 a.a.        Molecular weight: 14612.89 Da        Isoelectric Point: 6.2212

>T93353 WP_103274163.1 NZ_CP026124:c4091499-4091080 [Achromobacter sp. AONIH1]
MIVLDTNVVSEAMKPEPHPAVKTWLNDQVAETLYLSSVTLAEMMYGIGALPEGRRKRGLGMVFDGIVALFGERVLAFDAD
AAHHYAALAIKARAAGKGLPMADGYIAAIAAARGYAVATRDAAPFQAAGIAVINPWDAS

Download         Length: 420 bp

>T93353 NZ_CP026124:c4091499-4091080 [Achromobacter sp. AONIH1]
ATGATCGTCCTGGACACCAACGTCGTCTCCGAAGCGATGAAGCCCGAGCCGCATCCGGCGGTCAAGACCTGGTTGAACGA
CCAGGTGGCCGAGACCCTGTACCTGTCCAGCGTCACGCTCGCCGAGATGATGTACGGCATCGGCGCCCTGCCCGAAGGCC
GGCGCAAGCGCGGCCTGGGCATGGTCTTCGACGGCATCGTCGCGCTGTTCGGCGAGCGCGTGCTGGCCTTCGACGCCGAC
GCCGCCCATCACTACGCGGCGCTGGCCATCAAGGCGCGCGCCGCCGGCAAGGGCCTGCCAATGGCGGACGGTTATATTGC
CGCCATCGCCGCCGCCCGGGGATACGCCGTCGCCACCCGCGACGCCGCGCCCTTCCAGGCAGCGGGCATTGCCGTCATCA
ATCCCTGGGACGCGTCCTAG

Antitoxin


Download         Length: 85 a.a.        Molecular weight: 9487.93 Da        Isoelectric Point: 10.5729

>AT93353 WP_103274164.1 NZ_CP026124:c4091750-4091496 [Achromobacter sp. AONIH1]
MAILTVRNVPDEVHRALRLRAANHGRSTEAEVREILEHAVKAEQRPRLGDLLAELGRKAGLRNEDFAVLEDTRDRKPAKP
MKIA

Download         Length: 255 bp

>AT93353 NZ_CP026124:c4091750-4091496 [Achromobacter sp. AONIH1]
ATGGCGATCCTGACCGTCCGAAACGTGCCCGACGAAGTCCACCGCGCCCTGCGCCTGCGCGCGGCCAACCACGGCCGCAG
CACCGAGGCCGAAGTGCGCGAGATCCTGGAACACGCGGTGAAGGCCGAGCAGCGCCCGCGCCTGGGCGACCTGCTGGCGG
AACTCGGCCGCAAGGCCGGCCTGCGCAACGAGGACTTCGCCGTCCTGGAAGACACGCGCGACCGCAAACCCGCCAAGCCG
ATGAAAATCGCATGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References