Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) ataRT/DUF1778(antitoxin)
Location 3586300..3587100 Replicon chromosome
Accession NZ_CP025317
Organism Escherichia albertii strain 1551-2

Toxin (Protein)


Gene name ataT Uniprot ID B1EHN9
Locus tag CXP54_RS18325 Protein ID WP_000342453.1
Coordinates 3586300..3586827 (-) Length 176 a.a.

Antitoxin (Protein)


Gene name ataR Uniprot ID -
Locus tag CXP54_RS18330 Protein ID WP_098401847.1
Coordinates 3586834..3587100 (-) Length 89 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CXP54_RS18300 3581375..3582142 - 768 WP_000082101.1 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG -
CXP54_RS18305 3582139..3583416 - 1278 WP_059228517.1 branched chain amino acid ABC transporter permease LivM -
CXP54_RS18310 3583413..3584339 - 927 WP_103054014.1 high-affinity branched-chain amino acid ABC transporter permease LivH -
CXP54_RS18315 3584387..3585496 - 1110 WP_103054015.1 high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK -
CXP54_RS18320 3585920..3586303 + 384 WP_103054016.1 aspartate 1-decarboxylase autocleavage activator PanM -
CXP54_RS18325 3586300..3586827 - 528 WP_000342453.1 GNAT family N-acetyltransferase Toxin
CXP54_RS18330 3586834..3587100 - 267 WP_098401847.1 DUF1778 domain-containing protein Antitoxin
CXP54_RS18335 3587250..3588353 - 1104 WP_010319184.1 branched chain amino acid ABC transporter substrate-binding protein LivJ -
CXP54_RS18340 3588876..3589277 + 402 WP_103054017.1 PTS sugar transporter subunit IIA -
CXP54_RS18345 3589284..3589769 + 486 WP_000029259.1 PTS sugar transporter subunit IIB -
CXP54_RS18350 3589786..3590532 + 747 WP_000151888.1 PTS sugar transporter subunit IIC -
CXP54_RS18355 3590525..3591379 + 855 WP_103054018.1 PTS system mannose/fructose/sorbose family transporter subunit IID -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(88-150)

Antitoxin

(8-86)


Sequences


Toxin        


Download         Length: 176 a.a.        Molecular weight: 19676.58 Da        Isoelectric Point: 6.9585

>T90069 WP_000342453.1 NZ_CP025317:c3586827-3586300 [Escherichia albertii]
MDDLTIEILTDDADYDLQRFDCGEEALNLFLTTHLVRQHRNKILRAYILCRNTPERQVLGYYTLSGSCFERAALPSKSKQ
KKIPYKNIPSVTLGRLAIDRSLQGQGWGATLVAHAMKVVWSASLAVGIHGLFVEALNEKAHTFYQSLGFIPLVGENENAL
FFPTKSIELLFTQSD

Download         Length: 528 bp

>T90069 NZ_CP025317:c3586827-3586300 [Escherichia albertii]
ATGGATGATCTGACGATAGAGATTCTGACCGATGATGCAGATTATGATCTACAGCGATTCGACTGCGGCGAGGAAGCGTT
AAATCTCTTTCTGACGACACATCTGGTTCGTCAACATCGCAATAAAATTTTGCGAGCGTATATCCTTTGTCGCAACACTC
CAGAACGTCAGGTCCTGGGATATTACACATTATCCGGCAGTTGTTTTGAACGAGCCGCACTGCCCTCGAAATCGAAACAG
AAAAAAATTCCCTACAAAAATATTCCCAGCGTCACTCTTGGGCGTCTGGCAATTGATCGTTCATTACAGGGGCAGGGATG
GGGAGCAACACTGGTTGCTCATGCCATGAAAGTCGTCTGGTCAGCCTCATTAGCGGTAGGTATTCACGGTCTTTTTGTCG
AGGCTCTGAATGAAAAAGCCCATACGTTTTATCAGTCGCTGGGCTTTATCCCGTTGGTTGGAGAAAACGAAAATGCGTTA
TTTTTCCCAACCAAATCCATTGAACTGCTTTTTACACAGAGCGATTAA

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9919.34 Da        Isoelectric Point: 10.0862

>AT90069 WP_098401847.1 NZ_CP025317:c3587100-3586834 [Escherichia albertii]
MSAVKKQRIDLRLTDDDKSMIEEAAAISNQSVSQFMLNSASQRAAEVIEQNRRMILNEESWTRVMDALSNPPSPGEKLKR
AAKRLQGM

Download         Length: 267 bp

>AT90069 NZ_CP025317:c3587100-3586834 [Escherichia albertii]
ATGTCTGCTGTTAAAAAGCAGCGTATCGATCTGCGTTTAACTGACGATGACAAAAGTATGATTGAGGAAGCGGCAGCGAT
ATCTAATCAATCCGTCAGCCAATTTATGTTGAACAGCGCTTCGCAGCGAGCTGCGGAAGTGATTGAACAGAATCGGCGGA
TGATTCTCAATGAGGAATCCTGGACGCGGGTGATGGATGCGCTGAGTAATCCACCGTCACCAGGTGAAAAGTTAAAACGT
GCGGCAAAACGTCTTCAGGGAATGTAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure

References