Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) hipBA/HipA-HipB
Location 2132092..2133730 Replicon chromosome
Accession NZ_CP024885
Organism Klebsiella aerogenes strain AR_0009

Toxin (Protein)


Gene name hipA Uniprot ID A0A7U9APU8
Locus tag AM336_RS10860 Protein ID WP_001314390.1
Coordinates 2132402..2133730 (+) Length 443 a.a.

Antitoxin (Protein)


Gene name hipB Uniprot ID A0A754E9C8
Locus tag AM336_RS10855 Protein ID WP_001314389.1
Coordinates 2132092..2132397 (+) Length 102 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AM336_RS10835 2127134..2128171 + 1038 WP_001230900.1 hypothetical protein -
AM336_RS10845 2128529..2129122 - 594 WP_015368503.1 hypothetical protein -
AM336_RS10850 2129229..2131541 - 2313 WP_100280351.1 autotransporter outer membrane beta-barrel domain-containing protein -
AM336_RS10855 2132092..2132397 + 306 WP_001314389.1 helix-turn-helix transcriptional regulator Antitoxin
AM336_RS10860 2132402..2133730 + 1329 WP_001314390.1 type II toxin-antitoxin system HipA family toxin Toxin
AM336_RS10865 2133857..2134528 + 672 WP_000863683.1 hypothetical protein -
AM336_RS10870 2134594..2135727 - 1134 WP_015368501.1 helix-turn-helix domain-containing protein -
AM336_RS10875 2135746..2136285 - 540 WP_000938043.1 DUF2857 domain-containing protein -
AM336_RS10880 2136269..2137753 - 1485 WP_001060567.1 chromosome partitioning protein ParB -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

HipA, N-terminal subdomain 1

(8-108)

Antitoxin

Cro/C1-type helix-turn-helix domain

(20-68)


Sequences

Toxin        


Download         Length: 443 a.a.        Molecular weight: 50662.34 Da        Isoelectric Point: 4.9669

>T89075 WP_001314390.1 NZ_CP024885:2132402-2133730 [Klebsiella aerogenes]
MRRTQQRLAIWMNGIRVGFWEKARGEDSLQYLPEWVVDEQGRPLSLSLPFTPGNQLWRGNVVRDYFDNLLPDSEGIRRRL
AVRYQSESLEPFDLLAELGRDCVGAIQLLDVDEEPTDLFSVNYRPLSEADIATTLRNTTAASLPGRQDETDDLRLSIAGA
QEKTALLWHEEQWCLPEGNTPTTHIFKLPLGLVGNMQADMSTSVENEWLCSLLLEHYGIPVAKTQIAQFEDQKALVVERF
DRRWSGDRQWIIRLPQEDMCQALGVSPLRKYQSDGGPGISDIMDILSHSDQAEQDKEQFFRAQIIFWLLAATDGHAKNFS
IAIEPQSHYHLTPLYDVLSAWPVIGHGNNQISWQRCKLAMAVRGSSNYYHIYRIQRRHWINHGELTGLGRRQVESMMDDI
ISSTPEVIERVSMLLPESFPPELAECIFEGMRQQCRRLAGRE

Download         Length: 1329 bp

>T89075 NZ_CP024885:2132402-2133730 [Klebsiella aerogenes]
ATGCGTCGAACACAGCAGCGTTTAGCAATATGGATGAATGGAATCCGGGTCGGATTCTGGGAGAAGGCCAGAGGCGAGGA
TTCATTACAATATCTTCCAGAATGGGTAGTTGATGAACAGGGAAGACCTTTATCGCTTTCTTTGCCTTTCACTCCCGGTA
ATCAGCTTTGGCGCGGTAACGTTGTTCGTGACTATTTTGATAATTTATTGCCTGACAGCGAAGGTATACGCAGGCGTTTA
GCCGTACGTTACCAGTCTGAAAGCCTTGAGCCTTTTGATCTATTGGCTGAGCTGGGAAGAGACTGCGTTGGCGCAATACA
GTTACTGGATGTTGATGAAGAGCCCACGGATTTATTTTCCGTAAATTATCGCCCACTTTCTGAAGCTGATATAGCCACTA
CATTGCGTAATACTACGGCGGCATCGTTGCCTGGTCGGCAGGACGAAACTGACGATTTGCGTTTATCAATTGCCGGTGCG
CAGGAAAAAACGGCTTTATTGTGGCATGAAGAACAATGGTGTTTACCAGAAGGTAATACCCCAACAACGCATATCTTCAA
GCTACCGCTTGGGTTGGTTGGGAACATGCAAGCGGATATGAGTACATCGGTTGAAAATGAATGGCTGTGTTCTTTGCTTC
TTGAGCACTACGGGATCCCTGTAGCAAAAACGCAGATTGCGCAGTTTGAAGATCAAAAGGCATTAGTGGTTGAGCGTTTC
GACAGAAGATGGTCAGGCGATCGGCAATGGATCATTCGTTTGCCCCAAGAGGATATGTGTCAGGCTTTAGGTGTTTCTCC
GTTACGAAAATACCAGTCTGATGGTGGGCCGGGTATTTCCGATATTATGGACATATTGAGTCATTCAGATCAGGCTGAGC
AGGACAAAGAGCAGTTCTTCAGGGCGCAAATTATTTTCTGGTTGTTGGCTGCTACTGACGGCCATGCCAAAAATTTCAGT
ATCGCTATTGAGCCACAAAGTCATTACCACCTTACGCCTCTTTACGATGTTTTATCAGCATGGCCGGTAATTGGTCATGG
TAATAATCAGATTTCCTGGCAGAGATGCAAACTGGCAATGGCTGTTCGCGGTAGCAGTAATTATTACCACATTTATAGAA
TTCAACGGCGGCATTGGATCAATCATGGTGAATTAACCGGATTGGGAAGGCGACAAGTTGAGTCCATGATGGATGACATT
ATATCCAGCACGCCAGAAGTCATTGAGCGTGTATCTATGTTGCTTCCAGAGTCGTTTCCACCTGAGCTTGCTGAGTGTAT
TTTTGAAGGTATGCGGCAGCAGTGTAGGCGTTTGGCTGGAAGGGAATAA

Antitoxin


Download         Length: 102 a.a.        Molecular weight: 11363.02 Da        Isoelectric Point: 10.1481

>AT89075 WP_001314389.1 NZ_CP024885:2132092-2132397 [Klebsiella aerogenes]
MNTVYPLKTLNQIRPLLIGFRKANGLTQKEVSERLGVTQQTYARLEANPASASMERLFRVFTVLGVEMVLSSGPQILSSM
SSSTMDESEQQKDSPARREKW

Download         Length: 306 bp

>AT89075 NZ_CP024885:2132092-2132397 [Klebsiella aerogenes]
ATGAATACTGTTTATCCGTTGAAAACTTTGAATCAAATACGCCCATTGCTGATTGGCTTTCGCAAGGCTAATGGACTGAC
ACAAAAGGAAGTTTCTGAAAGGTTAGGAGTAACTCAGCAAACCTATGCCCGACTGGAAGCGAATCCAGCCAGTGCCAGTA
TGGAGCGACTATTCAGGGTATTTACCGTGCTGGGTGTTGAAATGGTACTCTCTTCTGGACCACAGATACTTTCCTCGATG
TCATCTTCAACAATGGATGAATCAGAACAACAAAAAGATTCACCTGCCAGAAGGGAAAAATGGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A7U9APU8

Antitoxin

Source ID Structure
AlphaFold DB A0A754E9C8

References