88039

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type IV Classification (family/domain) cptAB/-
Location 500768..501421 Replicon chromosome
Accession NZ_CP024576
Organism Acinetobacter baumannii strain AbPK1

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag CTI08_RS02405 Protein ID WP_000607077.1
Coordinates 501032..501421 (+) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID V5V966
Locus tag CTI08_RS02400 Protein ID WP_001288210.1
Coordinates 500768..501025 (+) Length 86 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CTI08_RS02380 496284..497291 + 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -
CTI08_RS02385 497310..497687 + 378 WP_001216380.1 50S ribosomal protein L17 -
CTI08_RS02390 497869..499359 + 1491 WP_000415125.1 NAD(P)/FAD-dependent oxidoreductase -
CTI08_RS02395 499408..500580 - 1173 WP_001190542.1 acyl-CoA dehydrogenase family protein -
CTI08_RS02400 500768..501025 + 258 WP_001288210.1 succinate dehydrogenase assembly factor 2 Antitoxin
CTI08_RS02405 501032..501421 + 390 WP_000607077.1 membrane protein Toxin
CTI08_RS02410 502191..503276 + 1086 WP_000049106.1 hypothetical protein -
CTI08_RS02415 503354..503920 + 567 WP_000651538.1 rhombosortase -
CTI08_RS02420 504108..506303 + 2196 WP_001158906.1 TRAP transporter large permease subunit -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

(10-82)


Sequences


Toxin        


Download         Length: 130 a.a.        Molecular weight: 15552.88 Da        Isoelectric Point: 10.4313

>T88039 WP_000607077.1 NZ_CP024576:501032-501421 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYKSQNTV
SRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Download         Length: 390 bp

>T88039 NZ_CP024576:501032-501421 [Acinetobacter baumannii]
TTGATCAACCATTTGAATTTTAAGCTGAAATATAGTCGTTTTTCGATTATATTTCAGTTTTTTATTGGCTTAAGCTTAGC
AGTTCTATTTTATCAATTAATGCCGTTACTATGGTGGTTAGTTGTAATCAGCTTACTATTTATCAGCTTTATTTTCTTTT
TAAAGCGTCCGCAGCTTGCACAAATTGCTTATTTAGATAAAAAACTATGGTCGCTTGCTTATAAGTCACAGAACACCGTT
TCTCGCGTCAAAATTTTAAAAATAATTGATTGTCAGATTTTCATAGTGATCTATTTTGAAGGTCATAAAACACTAACTTC
TATCATTTGGTTTGATCAAATGTCATTAGCAGAGTGGAAAAAGCTTAAAACTTTAGAAAAACTCTATTAA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10318.77 Da        Isoelectric Point: 4.6150

>AT88039 WP_001288210.1 NZ_CP024576:500768-501025 [Acinetobacter baumannii]
MSEEMTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLK
HYVHG

Download         Length: 258 bp

>AT88039 NZ_CP024576:500768-501025 [Acinetobacter baumannii]
ATGTCTGAAGAAATGACCTTGGAAGAACGTAAAGTAATCTATCGCGCACGTCGTGGTTTAAAGGAAATTGATGTCTATTT
TGACCCTTATGTGAAAAATTATTATTTAAAGGCAGACCCGGCAGAAAAAGCGTTGTTTGCTGAGTTGGTAGAACAGGAAG
ACCCTGATTTACTAGATTGGTTTATGGAAGTATCAGAACCACCACGTACCGAATTACGTGACTTTATCTATAAATTAAAA
CACTATGTTCATGGTTAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure
AlphaFold DB A0A7U4BQM7

References