80663

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) PP_4151-4152/excise(antitoxin)
Location 350475..351517 Replicon chromosome
Accession NZ_CP023255
Organism Pseudomonas aeruginosa strain CCUG 70744

Toxin (Protein)


Gene name PP_4152 Uniprot ID -
Locus tag CLH63_RS01725 Protein ID WP_003109777.1
Coordinates 350942..351517 (+) Length 192 a.a.

Antitoxin (Protein)


Gene name PP_4151 Uniprot ID I3TV68
Locus tag CLH63_RS01720 Protein ID WP_003050245.1
Coordinates 350475..350945 (+) Length 157 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CLH63_RS01685 345867..347285 - 1419 WP_003109776.1 TIGR03752 family integrating conjugative element protein -
CLH63_RS01690 347275..348186 - 912 WP_003105643.1 TIGR03749 family integrating conjugative element protein -
CLH63_RS01695 348183..348875 - 693 WP_003105641.1 TIGR03746 family integrating conjugative element protein -
CLH63_RS01700 348872..349270 - 399 WP_003105639.1 TIGR03750 family conjugal transfer protein -
CLH63_RS01705 349282..349641 - 360 WP_003090173.1 TIGR03745 family integrating conjugative element membrane protein -
CLH63_RS01710 349658..349891 - 234 WP_003050225.1 TIGR03758 family integrating conjugative element protein -
CLH63_RS01715 349888..350271 - 384 WP_110183889.1 RAQPRD family integrative conjugative element protein -
CLH63_RS01720 350475..350945 + 471 WP_003050245.1 helix-turn-helix domain-containing protein Antitoxin
CLH63_RS01725 350942..351517 + 576 WP_003109777.1 PIN domain-containing protein Toxin
CLH63_RS01730 351535..352449 + 915 WP_003105629.1 AAA family ATPase -
CLH63_RS01735 352446..352916 + 471 WP_003105626.1 hypothetical protein -
CLH63_RS01740 352913..353413 + 501 WP_003090159.1 hypothetical protein -
CLH63_RS01745 353413..354315 + 903 WP_003105624.1 nucleotidyltransferase domain-containing protein -
CLH63_RS01750 354354..355079 + 726 WP_003050273.1 CBASS effector endonuclease NucC -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Integrative and Conjugative Element - - 302032..400324 98292


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(9-114)

Antitoxin

(85-133)


Sequences


Toxin        


Download         Length: 192 a.a.        Molecular weight: 21644.79 Da        Isoelectric Point: 5.6172

>T80663 WP_003109777.1 NZ_CP023255:350942-351517 [Pseudomonas aeruginosa]
MRHSPFTAVYDACVLYPAPLRDFLMWLGLSGRFRARWSQAIHEEWKRNLLINRPDLTRVQVDRTSDLMDRAIPDGLVEGY
EALVAGLTLPDPDDRHVLAAAIRCGASVIVTFNERDFPNDLLAPYGIESQHPDEFVDNLLDLDAAAVVSAAQRQRAQLKH
PPIEVDRYLEILLRQGLVQTTKVLATYRTIL

Download         Length: 576 bp

>T80663 NZ_CP023255:350942-351517 [Pseudomonas aeruginosa]
ATGAGGCATTCCCCATTCACCGCCGTCTACGACGCGTGCGTTCTATATCCCGCGCCACTGCGGGATTTCCTGATGTGGCT
CGGCCTGTCTGGCCGCTTCCGGGCGCGGTGGAGCCAAGCCATTCATGAGGAGTGGAAACGCAACCTGTTGATCAACCGCC
CCGATCTCACCCGGGTTCAGGTCGACAGGACGTCGGATCTCATGGACCGGGCAATTCCGGACGGCTTGGTGGAGGGCTAC
GAAGCGCTCGTGGCAGGCCTGACATTGCCCGATCCGGACGACCGGCACGTCCTGGCTGCGGCGATTCGCTGCGGTGCGAG
CGTGATTGTGACGTTCAACGAACGGGATTTCCCGAACGATCTGCTGGCTCCGTACGGCATCGAATCGCAGCACCCCGATG
AGTTTGTGGACAACCTACTGGATCTGGACGCGGCCGCCGTGGTGTCGGCTGCGCAGCGCCAGCGTGCCCAACTCAAGCAT
CCGCCGATCGAGGTGGACCGCTATCTCGAAATCCTGCTGCGCCAGGGCCTTGTGCAAACGACCAAGGTGCTGGCGACCTA
TCGCACCATTCTCTGA

Antitoxin


Download         Length: 157 a.a.        Molecular weight: 17245.62 Da        Isoelectric Point: 6.3803

>AT80663 WP_003050245.1 NZ_CP023255:350475-350945 [Pseudomonas aeruginosa]
MTTATAQSKMTLPAAGEVKAAVQGQRALAAYLATQFETQHIQIFDDHKQAHQVELPTSALRLLVDILAELADGNAVKVVP
VHAELTTQEAADLLNVSRPHFVKLLEDGVLAFHRTGKHRRVRFADLMQYKEARERASEQAMAELAQQSQELGMGYE

Download         Length: 471 bp

>AT80663 NZ_CP023255:350475-350945 [Pseudomonas aeruginosa]
ATGACCACCGCCACTGCCCAATCCAAGATGACCCTTCCCGCCGCGGGAGAGGTGAAGGCAGCCGTCCAGGGTCAACGTGC
CTTGGCGGCTTACCTCGCAACCCAGTTCGAGACGCAGCACATCCAGATCTTTGATGACCACAAACAGGCTCATCAGGTGG
AACTGCCTACCTCGGCTTTACGCCTGCTGGTCGACATCCTGGCCGAGTTGGCCGATGGCAATGCAGTAAAGGTGGTGCCC
GTCCATGCAGAGCTGACGACCCAAGAGGCGGCGGACTTGCTCAACGTGTCCCGTCCCCATTTCGTCAAGCTGCTCGAAGA
TGGGGTGTTGGCATTTCATCGCACCGGCAAGCACCGCAGGGTGAGGTTCGCCGATCTGATGCAGTACAAGGAAGCGCGCG
AGCGCGCCAGTGAGCAGGCGATGGCCGAACTCGCTCAGCAGTCGCAAGAGTTGGGAATGGGATACGAATGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure
AlphaFold DB I3TV68

References