Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 604932..605568 Replicon chromosome
Accession NZ_CP023168
Organism Bacillus paralicheniformis strain 14DA11

Toxin (Protein)


Gene name mazF Uniprot ID M5P3Q9
Locus tag CK945_RS03035 Protein ID WP_003179128.1
Coordinates 605218..605568 (+) Length 117 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID M5PDU2
Locus tag CK945_RS03030 Protein ID WP_006638778.1
Coordinates 604932..605213 (+) Length 94 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CK945_RS03010 600043..601527 + 1485 WP_039073238.1 PH domain-containing protein -
CK945_RS03015 601524..602123 - 600 WP_048349919.1 rhomboid family intramembrane serine protease -
CK945_RS03020 602467..603426 + 960 WP_164468292.1 outer membrane lipoprotein carrier protein LolA -
CK945_RS03025 603651..604820 + 1170 WP_048349920.1 alanine racemase -
CK945_RS03030 604932..605213 + 282 WP_006638778.1 hypothetical protein Antitoxin
CK945_RS03035 605218..605568 + 351 WP_003179128.1 type II toxin-antitoxin system endoribonuclease NdoA Toxin
CK945_RS03040 605686..606513 + 828 WP_023857863.1 RsbT co-antagonist protein RsbRA -
CK945_RS03045 606517..606882 + 366 WP_031305225.1 STAS domain-containing protein -
CK945_RS03050 606885..607286 + 402 WP_023857861.1 anti-sigma regulatory factor -
CK945_RS03055 607297..608304 + 1008 WP_020450261.1 PP2C family protein-serine/threonine phosphatase -
CK945_RS03060 608363..608689 + 327 WP_020450262.1 anti-sigma factor antagonist -
CK945_RS03065 608689..609171 + 483 WP_020450263.1 anti-sigma B factor RsbW -
CK945_RS03070 609137..609928 + 792 WP_023857858.1 RNA polymerase sigma factor SigB -
CK945_RS03075 609925..610524 + 600 WP_035337155.1 SpoIIE family protein phosphatase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(1-113)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 117 a.a.        Molecular weight: 12990.03 Da        Isoelectric Point: 5.7234

>T80573 WP_003179128.1 NZ_CP023168:605218-605568 [Bacillus paralicheniformis]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNNIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMEKVNEALQISLALIDF

Download         Length: 351 bp

>T80573 NZ_CP023168:605218-605568 [Bacillus paralicheniformis]
TTGATTGTTAAACGCGGCGATGTTTATTTTGCTGACCTATCTCCTGTTGTTGGCTCAGAACAAGGCGGGGTGCGCCCGGT
TTTAGTGATTCAAAACAACATCGGCAATCGCTTCAGCCCAACTGCTATTGTTGCAGCCATAACAGCCCAAATACAGAAAG
CAAAATTACCTACCCACGTCGAAATTGATGCGAAACGCTACGGTTTTGAAAGAGATTCCGTTATATTGCTCGAACAAATT
CGGACGATTGACAAGCAAAGATTAACGGACAAAATCACCCATCTCGATGATGAAATGATGGAAAAGGTCAACGAAGCCTT
ACAAATCAGTTTGGCACTCATTGATTTTTAA

Antitoxin


Download         Length: 94 a.a.        Molecular weight: 10649.03 Da        Isoelectric Point: 4.6920

>AT80573 WP_006638778.1 NZ_CP023168:604932-605213 [Bacillus paralicheniformis]
MSESSATTEILIRLPEALVSELDGVVMQDNGSRNELIYQATKMYLRERKNRQIRESMRRGYMEMAKINLNISSEAQFAEY
EAENTVERLVSGG

Download         Length: 282 bp

>AT80573 NZ_CP023168:604932-605213 [Bacillus paralicheniformis]
TTGTCTGAATCCAGCGCAACAACTGAAATATTGATTCGCTTGCCAGAAGCTTTAGTATCAGAACTGGATGGTGTCGTCAT
GCAAGATAACGGGAGCAGAAATGAACTGATTTACCAAGCCACAAAAATGTATTTGCGCGAGCGCAAAAATCGACAAATTC
GGGAATCGATGAGACGCGGTTATATGGAGATGGCCAAGATTAATTTGAACATCTCTTCTGAGGCTCAATTTGCAGAGTAT
GAGGCTGAAAACACAGTAGAGCGCTTAGTAAGCGGAGGATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A6I7FHI4

Antitoxin

Source ID Structure
AlphaFold DB M5PDU2

References