Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 2059544..2060073 Replicon chromosome
Accession NZ_CP023076
Organism Staphylococcus argenteus strain XNO62

Toxin (Protein)


Gene name mazF Uniprot ID A0A7U7JQG1
Locus tag CJ017_RS10095 Protein ID WP_000621178.1
Coordinates 2059544..2059906 (-) Length 121 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID T1YCG8
Locus tag CJ017_RS10100 Protein ID WP_000948331.1
Coordinates 2059903..2060073 (-) Length 57 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CJ017_RS10070 2056526..2057296 - 771 WP_001041104.1 RNA polymerase sigma factor SigB -
CJ017_RS10075 2057271..2057750 - 480 WP_001190826.1 anti-sigma B factor RsbW -
CJ017_RS10080 2057752..2058078 - 327 WP_001052491.1 anti-sigma factor antagonist -
CJ017_RS10085 2058195..2059196 - 1002 WP_000390825.1 PP2C family protein-serine/threonine phosphatase -
CJ017_RS10095 2059544..2059906 - 363 WP_000621178.1 type II toxin-antitoxin system PemK/MazF family toxin Toxin
CJ017_RS10100 2059903..2060073 - 171 WP_000948331.1 type II toxin-antitoxin system antitoxin MazE Antitoxin
CJ017_RS10105 2060158..2061306 - 1149 WP_001281137.1 alanine racemase -
CJ017_RS10110 2061376..2061735 - 360 WP_031787685.1 holo-ACP synthase -
CJ017_RS10115 2061739..2062242 - 504 WP_031787686.1 PH domain-containing protein -
CJ017_RS10120 2062229..2063812 - 1584 WP_031787687.1 PH domain-containing protein -
CJ017_RS10125 2063805..2064284 - 480 WP_031787688.1 PH domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(3-110)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 121 a.a.        Molecular weight: 13502.79 Da        Isoelectric Point: 10.2892

>T80467 WP_000621178.1 NZ_CP023076:c2059906-2059544 [Staphylococcus argenteus]
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIR
TLDKKRLKEKLTYLSDNKMKEVDNALMISLGLNTMAHQKN

Download         Length: 363 bp

>T80467 NZ_CP023076:c2059906-2059544 [Staphylococcus argenteus]
ATGATTAGACGAGGAGATGTTTATTTAGCAGATTTATCACCAGTACAGGGATCTGAACAAGGGGGAGTCAGACCTGTTGT
CATTATTCAAAATGACACTGGTAATAAATATAGTCCTACAGTTATTGTTGCGGCAATAACTGGTAGGATTAATAAAGCCA
AAATACCGACCCATGTAGAGATTGAAAAGAAAAAATATAAACTGGATAAAGATTCAGTTATATTATTAGAACAAATTCGG
ACACTTGATAAAAAACGTTTAAAAGAAAAACTGACGTACTTATCAGACAACAAAATGAAAGAAGTAGATAATGCACTAAT
GATTAGTTTAGGGCTAAACACAATGGCTCATCAGAAAAATTAG

Antitoxin


Download         Length: 57 a.a.        Molecular weight: 6251.78 Da        Isoelectric Point: 3.8305

>AT80467 WP_000948331.1 NZ_CP023076:c2060073-2059903 [Staphylococcus argenteus]
MLSFSQNRSHSLEQSLKEGYSQMADLNLSLANEAFPIECEACDCNETYLSSNSTNE

Download         Length: 171 bp

>AT80467 NZ_CP023076:c2060073-2059903 [Staphylococcus argenteus]
ATGTTATCTTTTAGTCAAAATAGAAGTCATAGCTTAGAACAATCTTTAAAAGAAGGATATTCACAAATGGCTGATTTAAA
TCTCTCCCTAGCGAACGAAGCTTTTCCAATAGAGTGTGAAGCATGCGATTGCAACGAAACATATTTATCTTCTAATTCAA
CGAATGAATGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A7U7JQG1

Antitoxin

Source ID Structure
AlphaFold DB A0A0E0VRZ1

References