80306

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) Hha-TomB/-
Location 2466811..2467430 Replicon chromosome
Accession NZ_CP022997
Organism Klebsiella pneumoniae strain 721005

Toxin (Protein)


Gene name Hha Uniprot ID R8WYV2
Locus tag CI946_RS12540 Protein ID WP_002892050.1
Coordinates 2467212..2467430 (+) Length 73 a.a.

Antitoxin (Protein)


Gene name TomB Uniprot ID J2DPF6
Locus tag CI946_RS12535 Protein ID WP_002892066.1
Coordinates 2466811..2467185 (+) Length 125 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CI946_RS12525 2461963..2463156 + 1194 WP_002892072.1 multidrug efflux RND transporter periplasmic adaptor subunit AcrA -
CI946_RS12530 2463179..2466325 + 3147 WP_020326861.1 multidrug efflux RND transporter permease subunit -
CI946_RS12535 2466811..2467185 + 375 WP_002892066.1 Hha toxicity modulator TomB Antitoxin
CI946_RS12540 2467212..2467430 + 219 WP_002892050.1 hemolysin expression modulator Hha Toxin
CI946_RS12545 2467589..2468155 + 567 WP_002892030.1 maltose O-acetyltransferase -
CI946_RS28275 2468127..2468267 - 141 WP_004147370.1 hypothetical protein -
CI946_RS12550 2468288..2468758 + 471 WP_002892026.1 YlaC family protein -
CI946_RS12555 2468733..2470184 - 1452 WP_002892023.1 PLP-dependent aminotransferase family protein -
CI946_RS12560 2470285..2470983 + 699 WP_002892021.1 GNAT family N-acetyltransferase -
CI946_RS12565 2470980..2471120 - 141 WP_002892018.1 type B 50S ribosomal protein L36 -
CI946_RS12570 2471120..2471383 - 264 WP_002892011.1 type B 50S ribosomal protein L31 -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Haemolysin expression modulating, HHA

(13-69)

Antitoxin

Biofilm formation regulator YbaJ

(1-116)


Sequences

Toxin        


Download         Length: 73 a.a.        Molecular weight: 8628.00 Da        Isoelectric Point: 8.9008

>T80306 WP_002892050.1 NZ_CP022997:2467212-2467430 [Klebsiella pneumoniae]
MSDKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPTSVWKFIR

Download         Length: 219 bp

>T80306 NZ_CP022997:2467212-2467430 [Klebsiella pneumoniae]
ATGTCTGATAAGCCATTAACTAAAACAGACTATTTGATGCGCTTACGTCGTTGCCAGACAATTGACACGCTGGAGCGCGT
CATTGAAAAAAATAAATATGAACTGTCTGATAATGAGCTGGCGGTATTTTACTCAGCTGCCGACCATCGTCTGGCGGAAC
TGACCATGAATAAGCTATACGATAAAATCCCGACTTCTGTCTGGAAATTTATCCGCTAA

Antitoxin


Download         Length: 125 a.a.        Molecular weight: 14368.06 Da        Isoelectric Point: 4.8989

>AT80306 WP_002892066.1 NZ_CP022997:2466811-2467185 [Klebsiella pneumoniae]
MDEYSPKRHDIAQLRFLCETLYHDCLANLEESNHGWVNDPTSAVNLQLNELIEHIATFALNYKIKYAEDNKLIAQVDEYL
DDTFTLFSNYGINSTDLQKWKKSGNRLFRCFVNASRENPASLSC

Download         Length: 375 bp

>AT80306 NZ_CP022997:2466811-2467185 [Klebsiella pneumoniae]
ATGGACGAATACTCGCCAAAAAGACATGATATTGCACAGCTACGCTTTCTCTGCGAAACGCTGTATCATGACTGCCTTGC
AAACCTGGAAGAGAGCAACCATGGCTGGGTCAACGACCCGACGTCGGCTGTCAATCTCCAGTTAAATGAATTGATCGAGC
ACATTGCCACATTCGCTCTTAATTATAAAATTAAGTATGCAGAGGATAATAAGCTGATCGCTCAGGTTGACGAATATCTG
GACGACACTTTTACGTTGTTCAGTAACTACGGCATTAACTCTACGGATTTGCAAAAGTGGAAAAAATCCGGTAACCGACT
ATTTCGTTGCTTTGTCAACGCCAGCCGGGAAAACCCGGCCAGTCTATCGTGTTAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2P8K6F2

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GJ93

References