Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | TsdAT/- |
Location | 2159925..2160439 | Replicon | chromosome |
Accession | NZ_CP022899 | ||
Organism | Staphylococcus aureus strain 143 |
Toxin (Protein)
Gene name | TsdT | Uniprot ID | A0A7U7IDH9 |
Locus tag | CGP95_RS11000 | Protein ID | WP_000581791.1 |
Coordinates | 2159925..2160134 (-) | Length | 70 a.a. |
Antitoxin (Protein)
Gene name | TsdA | Uniprot ID | A0A0D1GBN9 |
Locus tag | CGP95_RS11005 | Protein ID | WP_000138934.1 |
Coordinates | 2160146..2160439 (-) | Length | 98 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CGP95_RS10980 | 2155814..2156884 | - | 1071 | WP_000159639.1 | D-alanine--D-alanine ligase | - |
CGP95_RS10985 | 2157202..2158404 | + | 1203 | WP_001109939.1 | rod shape-determining protein RodA | - |
CGP95_RS10990 | 2158565..2159248 | - | 684 | Protein_2041 | transposase | - |
CGP95_RS10995 | 2159660..2159797 | - | 138 | WP_000828354.1 | hypothetical protein | - |
CGP95_RS11000 | 2159925..2160134 | - | 210 | WP_000581791.1 | heavy-metal-associated domain-containing protein | Toxin |
CGP95_RS11005 | 2160146..2160439 | - | 294 | WP_000138934.1 | copper-sensing transcriptional repressor CsoR | Antitoxin |
CGP95_RS11010 | 2160605..2162089 | + | 1485 | WP_000571560.1 | cardiolipin synthase | - |
CGP95_RS11015 | 2162117..2162764 | + | 648 | WP_001187612.1 | HD domain-containing protein | - |
CGP95_RS11025 | 2162921..2163220 | + | 300 | WP_001793952.1 | hypothetical protein | - |
CGP95_RS11030 | 2163377..2164249 | - | 873 | WP_000725802.1 | membrane protein insertase YidC | - |
CGP95_RS11035 | 2164335..2164976 | - | 642 | WP_000483150.1 | thiamine phosphate synthase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 70 a.a. Molecular weight: 7826.83 Da Isoelectric Point: 4.1008
>T79966 WP_000581791.1 NZ_CP022899:c2160134-2159925 [Staphylococcus aureus]
MIHQNTIYTAGIETEEQVSQLTERISNMIGVHQVIINIIDGQVTVAYETPANLNSIEKEIYDEGYKIVF
MIHQNTIYTAGIETEEQVSQLTERISNMIGVHQVIINIIDGQVTVAYETPANLNSIEKEIYDEGYKIVF
Download Length: 210 bp
>T79966 NZ_CP022899:c2160134-2159925 [Staphylococcus aureus]
ATGATACATCAAAATACGATTTACACAGCGGGAATTGAAACAGAAGAACAAGTAAGTCAATTGACAGAACGCATTTCAAA
TATGATAGGTGTTCATCAAGTGATTATTAATATAATAGACGGTCAGGTAACTGTAGCGTATGAGACACCAGCAAATTTGA
ATAGTATTGAAAAAGAAATCTATGATGAAGGATACAAAATTGTATTTTAG
ATGATACATCAAAATACGATTTACACAGCGGGAATTGAAACAGAAGAACAAGTAAGTCAATTGACAGAACGCATTTCAAA
TATGATAGGTGTTCATCAAGTGATTATTAATATAATAGACGGTCAGGTAACTGTAGCGTATGAGACACCAGCAAATTTGA
ATAGTATTGAAAAAGAAATCTATGATGAAGGATACAAAATTGTATTTTAG
Antitoxin
Download Length: 98 a.a. Molecular weight: 11185.77 Da Isoelectric Point: 6.2243
>AT79966 WP_000138934.1 NZ_CP022899:c2160439-2160146 [Staphylococcus aureus]
MTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVLTQIRATRSALNSVATKLLEQHMKSCIMNKVNQGAQ
EEAMEELLVTFQKLIKD
MTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVLTQIRATRSALNSVATKLLEQHMKSCIMNKVNQGAQ
EEAMEELLVTFQKLIKD
Download Length: 294 bp
>AT79966 NZ_CP022899:c2160439-2160146 [Staphylococcus aureus]
ATGACTGAACAAGATAATGCACATCATTCTGAACAAATAAAAACGAATCTTAAATCACGTTTAAATCGAATTGAAGGACA
AGTGAGAGCGATTAATCGCATGATTGAAGAAGATGTCTATTGTGATGATGTCCTTACGCAAATAAGAGCGACACGTTCGG
CGTTAAACAGTGTTGCGACAAAGTTATTAGAACAACATATGAAAAGTTGTATTATGAATAAAGTTAATCAAGGTGCTCAG
GAAGAGGCAATGGAAGAGTTATTAGTGACTTTTCAAAAATTGATTAAAGACTAA
ATGACTGAACAAGATAATGCACATCATTCTGAACAAATAAAAACGAATCTTAAATCACGTTTAAATCGAATTGAAGGACA
AGTGAGAGCGATTAATCGCATGATTGAAGAAGATGTCTATTGTGATGATGTCCTTACGCAAATAAGAGCGACACGTTCGG
CGTTAAACAGTGTTGCGACAAAGTTATTAGAACAACATATGAAAAGTTGTATTATGAATAAAGTTAATCAAGGTGCTCAG
GAAGAGGCAATGGAAGAGTTATTAGTGACTTTTCAAAAATTGATTAAAGACTAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A7U7IDH9 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0D1GBN9 |