Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /DUF1778(antitoxin)
Location 576812..577611 Replicon chromosome
Accession NZ_CP022742
Organism Vibrio qinghaiensis strain Q67

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag CCZ37_RS15930 Protein ID WP_094501477.1
Coordinates 576812..577345 (-) Length 178 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag CCZ37_RS15935 Protein ID WP_094501479.1
Coordinates 577342..577611 (-) Length 90 a.a.

Genomic Context

CCZ37_RS15900CCZ37_RS15910CCZ37_RS15915CCZ37_RS15930CCZ37_RS15935CCZ37_RS15940CCZ37_RS15945CCZ37_RS15950CCZ37_RS18905CCZ37_RS15960
Location: 572104..572643 (540 bp)
Type: Others
Protein ID: WP_094501475.1
Location: 573250..573360 (111 bp)
Type: Others
Protein ID: WP_080115560.1
Location: 573357..573680 (324 bp)
Type: Others
Protein ID: WP_004397191.1
Location: 576812..577345 (534 bp)
Type: Toxin
Protein ID: WP_094501477.1
Location: 577342..577611 (270 bp)
Type: Antitoxin
Protein ID: WP_094501479.1
Location: 580495..580776 (282 bp)
Type: Others
Protein ID: WP_170895745.1
Location: 580822..580941 (120 bp)
Type: Others
Protein ID: WP_020977912.1
Location: 580966..581256 (291 bp)
Type: Others
Protein ID: WP_080536237.1
Location: 581874..581984 (111 bp)
Type: Others
Protein ID: Protein_500
Location: 581981..582466 (486 bp)
Type: Others
Protein ID: WP_094501482.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
CCZ37_RS15900572104..572643-540WP_094501475.1hypothetical protein-
CCZ37_RS15910573250..573360-111WP_080115560.1DUF3265 domain-containing protein-
CCZ37_RS15915573357..573680-324WP_004397191.1hypothetical protein-
CCZ37_RS15930576812..577345-534WP_094501477.1GNAT family N-acetyltransferaseToxin
CCZ37_RS15935577342..577611-270WP_094501479.1DUF1778 domain-containing proteinAntitoxin
CCZ37_RS15940580495..580776-282WP_170895745.1hypothetical protein-
CCZ37_RS15945580822..580941-120WP_020977912.1DUF3265 domain-containing protein-
CCZ37_RS15950580966..581256-291WP_080536237.1YkgJ family cysteine cluster protein-
CCZ37_RS18905581874..581984-111Protein_500DUF3265 domain-containing protein-
CCZ37_RS15960581981..582466-486WP_094501482.1GNAT family N-acetyltransferase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-insideIntegron--569077..720478151401


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(97-153)

Antitoxin

Vibrio phage ICP1, Orf50

(5-81)


Sequences

Toxin        


Download         Length: 178 a.a.        Molecular weight: 20118.44 Da        Isoelectric Point: 9.4355

>T79702 WP_094501477.1 NZ_CP022742:c577345-576812 [Vibrio qinghaiensis]
VSWGKEFVELSKSKHDRDSFDCGEQELNTFIKTQAAKHMQAGISRTMVLPSAQPLLNQKFAICAFYSVAPSSISRETLPA
QLAKKLPRYPIPVFLLAQLAVHKEFHGSGLGKVSLIRALKYLWEVNHHMRVYAIVVDCLTDSAQAFYTKFGFEVLCEHNG
RIRMFLPMKTVEQLFNQ

Download         Length: 534 bp

>T79702 NZ_CP022742:c577345-576812 [Vibrio qinghaiensis]
GTGAGTTGGGGCAAAGAGTTTGTAGAACTTAGTAAATCAAAGCATGACCGCGACTCATTTGACTGTGGTGAGCAAGAGCT
AAACACATTTATCAAAACTCAAGCTGCAAAGCACATGCAAGCAGGTATTAGCCGAACAATGGTTTTACCTAGTGCTCAAC
CACTGTTAAATCAAAAATTCGCTATTTGTGCATTTTATAGTGTTGCACCGAGTTCAATCAGTCGAGAAACATTGCCGGCA
CAACTAGCAAAGAAACTCCCTAGGTATCCAATTCCTGTTTTTCTTTTGGCTCAATTAGCTGTGCACAAAGAATTTCATGG
CTCTGGGCTCGGAAAAGTTAGTCTAATTCGCGCACTGAAGTACTTGTGGGAAGTGAATCATCACATGAGAGTATACGCAA
TTGTTGTGGACTGTCTGACAGATTCCGCTCAAGCGTTCTATACGAAGTTCGGCTTTGAAGTGTTGTGCGAACATAATGGG
CGTATTCGTATGTTCTTACCAATGAAAACGGTAGAACAGCTTTTTAATCAATAG

Antitoxin


Download         Length: 90 a.a.        Molecular weight: 9892.43 Da        Isoelectric Point: 4.9000

>AT79702 WP_094501479.1 NZ_CP022742:c577611-577342 [Vibrio qinghaiensis]
MATARLDIRLDEDIKAKAEKASALLGLKSLTEYVVRLMDEDATHVIEEHESIMVKDSVFDEFIAACNKVKAPNQALLEAV
KFTEKSGIK

Download         Length: 270 bp

>AT79702 NZ_CP022742:c577611-577342 [Vibrio qinghaiensis]
ATGGCAACGGCACGTTTAGATATCCGCCTTGATGAAGATATCAAGGCAAAGGCCGAAAAAGCATCGGCTTTACTTGGTTT
AAAAAGTCTCACTGAATATGTGGTGAGACTTATGGACGAAGATGCGACTCATGTTATTGAGGAGCATGAAAGTATTATGG
TTAAAGACAGTGTTTTTGACGAGTTTATAGCTGCGTGTAATAAAGTAAAAGCTCCGAATCAAGCTTTGCTTGAAGCTGTT
AAATTTACAGAGAAGAGCGGTATCAAGTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
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Antitoxin

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Source
ID
Structure
No matching records found

References