79154

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) pmenTA/darT(toxin)
Location 497833..499544 Replicon chromosome
Accession NZ_CP022522
Organism Pseudoalteromonas sp. NC201

Toxin (Protein)


Gene name pmenT Uniprot ID -
Locus tag PNC201_RS02140 Protein ID WP_199539672.1
Coordinates 498897..499544 (-) Length 216 a.a.

Antitoxin (Protein)


Gene name pmenA Uniprot ID -
Locus tag PNC201_RS02135 Protein ID WP_102056026.1
Coordinates 497833..498897 (-) Length 355 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PNC201_RS02125 493888..494634 - 747 WP_102056024.1 M48 family metallopeptidase -
PNC201_RS02130 494634..497795 - 3162 WP_102056025.1 type I restriction endonuclease subunit R -
PNC201_RS02135 497833..498897 - 1065 WP_102056026.1 macro domain-containing protein Antitoxin
PNC201_RS02140 498897..499544 - 648 WP_199539672.1 DUF4433 domain-containing protein Toxin
PNC201_RS02145 499546..500121 - 576 WP_102056027.1 DUF4433 domain-containing protein -
PNC201_RS02150 500138..501445 - 1308 WP_102056028.1 restriction endonuclease subunit S -
PNC201_RS02155 501442..503949 - 2508 WP_102056029.1 type I restriction-modification system subunit M -
PNC201_RS02160 503983..504222 - 240 WP_045964924.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

ssDNA thymidine ADP-ribosyltransferase, DarT

(16-215)

Antitoxin

Macro domain

(18-128)


Sequences

Toxin        


Download         Length: 216 a.a.        Molecular weight: 24981.54 Da        Isoelectric Point: 7.4368

>T79154 WP_199539672.1 NZ_CP022522:c499544-498897 [Pseudoalteromonas sp. NC201]
MYNYSQTLNPQKALIWRIVHRNNIPWILDNGLYCGNSQVQSPNWEAIGSSELIQKRATHPVPISPFGSLNDYVPFYFTPF
SPMLLNIKSGRGVIQRANEDIVILVSSLHKVEQLNLDFVYTDMHAYYLWANFYSDLKHLGAVDWPILQARDFARDQNDPA
KFERYQAEALIKQHCPINALLGVVCYNAQVEQQLKQHIQQRNMNLDVIVRPGWYF

Download         Length: 648 bp

>T79154 NZ_CP022522:c499544-498897 [Pseudoalteromonas sp. NC201]
TTGTATAACTACAGTCAAACCCTTAACCCACAAAAAGCGCTGATTTGGCGCATAGTGCATCGTAACAATATACCATGGAT
CTTAGATAACGGCTTGTATTGTGGTAATAGTCAGGTGCAGTCACCTAATTGGGAAGCTATAGGTAGTTCGGAGTTAATAC
AAAAGCGAGCAACTCATCCAGTCCCTATTTCTCCTTTTGGTTCGTTAAATGACTATGTACCTTTTTACTTTACCCCTTTC
TCACCTATGTTGCTCAATATAAAGTCAGGGCGAGGCGTTATTCAGCGGGCTAACGAAGACATTGTTATTTTGGTATCATC
GTTACATAAAGTTGAACAATTAAACTTGGATTTTGTCTATACGGACATGCATGCCTATTACCTATGGGCTAACTTTTATT
CTGATTTAAAGCACTTAGGAGCTGTAGATTGGCCTATTTTACAGGCAAGAGATTTTGCTAGAGATCAGAATGATCCCGCC
AAGTTTGAGCGATATCAGGCAGAGGCATTAATCAAACAGCATTGCCCTATCAATGCTTTATTAGGCGTAGTTTGTTACAA
CGCGCAAGTTGAACAACAATTAAAACAACATATTCAACAGCGCAATATGAATTTGGATGTCATTGTGCGTCCTGGATGGT
ACTTTTAA

Antitoxin


Download         Length: 355 a.a.        Molecular weight: 40033.98 Da        Isoelectric Point: 6.1668

>AT79154 WP_102056026.1 NZ_CP022522:c498897-497833 [Pseudoalteromonas sp. NC201]
MITYTQGNLLEANADALVNTVNTVGVMGKGIALMFKERFPKNMAEYAAACKAKRVNTGQMFVTETGELMGPRWIVNFPTK
QHWRAKSKMEWIQDGLVDLRHFIENNNVGSIAIPPLGAGQGGLSWPDVKIEIEKALSDIENTNIIVFEPTSKYQNVAKKS
GVKKLTPARALVAELVRRYWILGMECSLLEIQKLAWFLQRTIERSGLKNELKLNFEANYYGPYANNLEHLLNALDGSYLK
SDKRIPDCDPLDVIWFNENERQKVSTYLSTEAKEYLPALEEATQVINGFESPFGLELLSTVDWLITKQGCDKTVESIKEG
IANWPTGDKWALRKLTLFGDREIQFALTNLENLH

Download         Length: 1065 bp

>AT79154 NZ_CP022522:c498897-497833 [Pseudoalteromonas sp. NC201]
ATGATCACATATACACAAGGTAATTTACTCGAAGCTAACGCAGATGCTCTAGTCAATACAGTTAATACTGTAGGGGTTAT
GGGTAAAGGCATTGCGTTAATGTTCAAAGAGCGCTTTCCTAAAAACATGGCTGAATATGCAGCTGCCTGCAAGGCTAAGC
GAGTAAACACCGGTCAAATGTTTGTTACTGAAACAGGCGAATTAATGGGACCTAGGTGGATAGTAAACTTCCCTACCAAG
CAGCACTGGCGTGCAAAATCTAAAATGGAATGGATTCAAGATGGATTAGTCGATCTTCGCCACTTTATAGAAAACAATAA
TGTTGGTTCTATAGCAATTCCTCCACTTGGCGCAGGGCAAGGCGGCTTGTCCTGGCCTGACGTAAAAATAGAAATTGAAA
AAGCATTATCCGATATTGAAAATACAAATATCATTGTATTCGAGCCTACCAGTAAATATCAAAATGTGGCTAAAAAGTCT
GGCGTCAAGAAACTAACACCAGCGAGAGCTTTAGTTGCCGAGTTAGTAAGACGTTATTGGATATTGGGCATGGAGTGCAG
TTTGCTGGAAATTCAAAAGCTAGCTTGGTTTTTGCAAAGAACCATTGAAAGATCAGGCTTGAAAAATGAGTTAAAGCTTA
ATTTCGAAGCAAATTATTATGGGCCCTATGCCAACAACTTAGAGCACTTGTTAAATGCTTTAGATGGTAGTTATTTGAAA
TCAGATAAACGTATTCCTGATTGTGATCCTTTAGATGTCATCTGGTTCAATGAAAACGAGAGACAAAAAGTTTCGACCTA
CTTAAGCACCGAGGCGAAAGAGTATTTACCTGCATTAGAAGAAGCAACTCAAGTAATTAATGGCTTCGAATCTCCTTTTG
GCTTAGAGCTTTTGTCTACAGTGGATTGGCTTATTACTAAGCAAGGATGTGATAAAACAGTTGAGTCAATAAAAGAAGGC
ATAGCCAACTGGCCTACTGGAGACAAATGGGCACTGCGCAAGTTAACCTTATTTGGCGATAGAGAAATTCAATTTGCTTT
GACTAATTTGGAAAACCTACATTAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References