Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | /DUF1778(antitoxin) |
| Location | 557028..557977 | Replicon | chromosome |
| Accession | NZ_CP022104 | ||
| Organism | Vibrio anguillarum strain CNEVA NB11008 | ||
Toxin (Protein)
| Gene name | - | Uniprot ID | A0A853R148 |
| Locus tag | CEQ50_RS17455 | Protein ID | WP_017045662.1 |
| Coordinates | 557444..557977 (+) | Length | 178 a.a. |
Antitoxin (Protein)
| Gene name | - | Uniprot ID | - |
| Locus tag | CEQ50_RS20100 | Protein ID | WP_198300529.1 |
| Coordinates | 557028..557447 (+) | Length | 140 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEQ50_RS17400 | 552998..554175 | + | 1178 | WP_088733270.1 | IS3 family transposase | - |
| CEQ50_RS17405 | 554181..554951 | + | 771 | Protein_541 | hypothetical protein | - |
| CEQ50_RS17410 | 555091..555588 | - | 498 | WP_088733355.1 | GNAT family N-acetyltransferase | - |
| CEQ50_RS17415 | 555585..555857 | - | 273 | WP_010319336.1 | DUF1778 domain-containing protein | - |
| CEQ50_RS17420 | 555897..556058 | + | 162 | WP_088733356.1 | DUF3265 domain-containing protein | - |
| CEQ50_RS17435 | 556243..556425 | + | 183 | WP_088733358.1 | DUF645 family protein | - |
| CEQ50_RS20100 | 557028..557447 | + | 420 | WP_198300529.1 | DUF1778 domain-containing protein | Antitoxin |
| CEQ50_RS17455 | 557444..557977 | + | 534 | WP_017045662.1 | GNAT family N-acetyltransferase | Toxin |
| CEQ50_RS17460 | 558134..558448 | + | 315 | WP_017045663.1 | hypothetical protein | - |
| CEQ50_RS17465 | 558526..559368 | + | 843 | WP_088733361.1 | hypothetical protein | - |
| CEQ50_RS20025 | 559353..559532 | - | 180 | Protein_550 | IS30 family transposase | - |
| CEQ50_RS17475 | 560794..561569 | - | 776 | Protein_552 | IS30 family transposase | - |
| CEQ50_RS17485 | 561815..562096 | + | 282 | WP_017045723.1 | hypothetical protein | - |
| CEQ50_RS17490 | 562444..562713 | + | 270 | WP_081245404.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 547574..572505 | 24931 | |
| - | inside | Integron | - | - | 416630..557447 | 140817 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 178 a.a. Molecular weight: 20206.61 Da Isoelectric Point: 9.3915
>T78454 WP_017045662.1 NZ_CP022104:557444-557977 [Vibrio anguillarum]
VSWGKEFVELSKSKHDRDSFDCGEQELNTFIKTQAAKHMQAGISRTMVLPSAQPLLNQKFAICAFYSVAPSSISRETLPV
QLAKKLPRYPIPVFLLAQLAVHKEYHGSGLGKISLIRALKYLWEVNHHMRVYAIVVDCLTDSAQAFYTKFGFEVLCEHNG
RIRMFLPMKMVEQLFNQ
VSWGKEFVELSKSKHDRDSFDCGEQELNTFIKTQAAKHMQAGISRTMVLPSAQPLLNQKFAICAFYSVAPSSISRETLPV
QLAKKLPRYPIPVFLLAQLAVHKEYHGSGLGKISLIRALKYLWEVNHHMRVYAIVVDCLTDSAQAFYTKFGFEVLCEHNG
RIRMFLPMKMVEQLFNQ
Download Length: 534 bp
>T78454 NZ_CP022104:557444-557977 [Vibrio anguillarum]
GTGAGTTGGGGTAAAGAGTTTGTAGAACTTAGTAAGTCAAAGCATGACCGCGATTCATTTGACTGTGGAGAGCAAGAGCT
AAACACATTTATCAAAACTCAAGCTGCAAAGCACATGCAAGCAGGTATTAGCCGAACAATGGTTTTACCTAGTGCTCAAC
CACTGTTAAATCAAAAATTCGCTATTTGTGCATTTTATAGTGTTGCACCGAGTTCAATCAGTCGAGAAACATTGCCAGTA
CAACTAGCAAAGAAACTTCCTAGGTATCCAATCCCTGTTTTTCTTTTGGCTCAATTAGCTGTGCACAAAGAGTATCATGG
CTCTGGGCTCGGAAAAATTAGTCTAATTCGCGCACTGAAGTACTTGTGGGAAGTGAATCACCACATGAGGGTATACGCAA
TTGTTGTGGACTGTCTGACAGATTCCGCTCAAGCGTTCTATACGAAGTTTGGTTTTGAAGTATTGTGTGAACATAATGGG
CGTATTCGTATGTTCTTACCAATGAAAATGGTAGAACAGCTTTTTAATCAATAG
GTGAGTTGGGGTAAAGAGTTTGTAGAACTTAGTAAGTCAAAGCATGACCGCGATTCATTTGACTGTGGAGAGCAAGAGCT
AAACACATTTATCAAAACTCAAGCTGCAAAGCACATGCAAGCAGGTATTAGCCGAACAATGGTTTTACCTAGTGCTCAAC
CACTGTTAAATCAAAAATTCGCTATTTGTGCATTTTATAGTGTTGCACCGAGTTCAATCAGTCGAGAAACATTGCCAGTA
CAACTAGCAAAGAAACTTCCTAGGTATCCAATCCCTGTTTTTCTTTTGGCTCAATTAGCTGTGCACAAAGAGTATCATGG
CTCTGGGCTCGGAAAAATTAGTCTAATTCGCGCACTGAAGTACTTGTGGGAAGTGAATCACCACATGAGGGTATACGCAA
TTGTTGTGGACTGTCTGACAGATTCCGCTCAAGCGTTCTATACGAAGTTTGGTTTTGAAGTATTGTGTGAACATAATGGG
CGTATTCGTATGTTCTTACCAATGAAAATGGTAGAACAGCTTTTTAATCAATAG
Antitoxin
Download Length: 140 a.a. Molecular weight: 15524.06 Da Isoelectric Point: 6.2324
>AT78454 WP_198300529.1 NZ_CP022104:557028-557447 [Vibrio anguillarum]
MRQLLYCVPAPLNAALYSLSFRKLSVLIEYALSLHYNQSGYGMYPYVGGVMATARLDIRLDEEIKAKAEKASALLGLKSL
TEYVVRLMDEDATHVIEEHESIMVKDSVFDEFMAACNKVKAPNQALLEAVKFTDKSGIK
MRQLLYCVPAPLNAALYSLSFRKLSVLIEYALSLHYNQSGYGMYPYVGGVMATARLDIRLDEEIKAKAEKASALLGLKSL
TEYVVRLMDEDATHVIEEHESIMVKDSVFDEFMAACNKVKAPNQALLEAVKFTDKSGIK
Download Length: 420 bp
>AT78454 NZ_CP022104:557028-557447 [Vibrio anguillarum]
ATGCGGCAACTTTTGTATTGCGTGCCTGCGCCCCTTAACGCGGCGTTATATTCTCTCTCGTTCCGTAAACTTTCCGTACT
AATTGAATATGCTTTAAGTTTGCATTATAATCAATCAGGTTACGGAATGTATCCGTACGTTGGAGGGGTTATGGCAACGG
CACGTTTAGATATCCGCCTTGATGAAGAGATCAAGGCAAAAGCCGAAAAAGCATCGGCTTTACTTGGTTTAAAAAGTCTC
ACTGAATATGTAGTGAGACTTATGGACGAAGATGCGACTCATGTTATTGAGGAGCATGAAAGTATTATGGTTAAAGACAG
TGTTTTTGATGAATTTATGGCTGCATGTAATAAAGTAAAAGCACCGAATCAAGCTTTGCTTGAAGCGGTTAAATTTACAG
ATAAGAGTGGTATCAAGTGA
ATGCGGCAACTTTTGTATTGCGTGCCTGCGCCCCTTAACGCGGCGTTATATTCTCTCTCGTTCCGTAAACTTTCCGTACT
AATTGAATATGCTTTAAGTTTGCATTATAATCAATCAGGTTACGGAATGTATCCGTACGTTGGAGGGGTTATGGCAACGG
CACGTTTAGATATCCGCCTTGATGAAGAGATCAAGGCAAAAGCCGAAAAAGCATCGGCTTTACTTGGTTTAAAAAGTCTC
ACTGAATATGTAGTGAGACTTATGGACGAAGATGCGACTCATGTTATTGAGGAGCATGAAAGTATTATGGTTAAAGACAG
TGTTTTTGATGAATTTATGGCTGCATGTAATAAAGTAAAAGCACCGAATCAAGCTTTGCTTGAAGCGGTTAAATTTACAG
ATAAGAGTGGTATCAAGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|