Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 509423..510059 Replicon chromosome
Accession NZ_CP021892
Organism Bacillus subtilis subsp. subtilis strain SRCM100333

Toxin (Protein)


Gene name mazF Uniprot ID G4NU33
Locus tag S100333_RS02625 Protein ID WP_003156187.1
Coordinates 509709..510059 (+) Length 117 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID G4NU32
Locus tag S100333_RS02620 Protein ID WP_003225183.1
Coordinates 509423..509704 (+) Length 94 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
S100333_RS02600 505782..506381 - 600 WP_003246687.1 rhomboid family intramembrane serine protease -
S100333_RS02605 506476..506841 + 366 WP_014478897.1 holo-ACP synthase -
S100333_RS02610 507007..508023 + 1017 WP_003234282.1 outer membrane lipoprotein carrier protein LolA -
S100333_RS02615 508138..509307 + 1170 WP_014478898.1 alanine racemase -
S100333_RS02620 509423..509704 + 282 WP_003225183.1 type II toxin-antitoxin system antitoxin EndoAI Antitoxin
S100333_RS02625 509709..510059 + 351 WP_003156187.1 type II toxin-antitoxin system endoribonuclease NdoA Toxin
S100333_RS02630 510164..510988 + 825 WP_088272172.1 RsbT co-antagonist protein RsbRA -
S100333_RS02635 510993..511358 + 366 WP_003225190.1 RsbT antagonist protein RsbS -
S100333_RS02640 511362..511763 + 402 WP_017697001.1 serine/threonine-protein kinase RsbT -
S100333_RS02645 511775..512782 + 1008 WP_003234295.1 phosphoserine phosphatase RsbU -
S100333_RS02650 512844..513173 + 330 WP_014662855.1 anti-sigma factor antagonist RsbV -
S100333_RS02655 513170..513652 + 483 WP_003234299.1 anti-sigma B factor RsbW -
S100333_RS02660 513618..514406 + 789 WP_003246715.1 RNA polymerase sigma factor SigB -
S100333_RS02665 514406..515005 + 600 WP_017696999.1 phosphoserine phosphatase RsbX -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(4-111)

Antitoxin

(12-45)


Sequences


Toxin        


Download         Length: 117 a.a.        Molecular weight: 12977.98 Da        Isoelectric Point: 4.8781

>T77791 WP_003156187.1 NZ_CP021892:509709-510059 [Bacillus subtilis subsp. subtilis]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF

Download         Length: 351 bp

>T77791 NZ_CP021892:509709-510059 [Bacillus subtilis subsp. subtilis]
TTGATTGTGAAACGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGTTGGCTCAGAGCAAGGCGGGGTGCGCCCGGT
CTTAGTGATCCAAAATGACATCGGAAATCGCTTCAGCCCAACTGCTATTGTTGCAGCCATAACAGCACAAATACAGAAAG
CGAAATTACCAACCCACGTCGAAATCGATGCAAAACGCTACGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATT
CGGACGATTGACAAGCAAAGGTTAACGGATAAGATTACTCATCTGGATGATGAAATGATGGATAAGGTTGATGAAGCCTT
ACAAATCAGTTTGGCACTCATTGATTTTTAG

Antitoxin


Download         Length: 94 a.a.        Molecular weight: 10546.92 Da        Isoelectric Point: 6.4708

>AT77791 WP_003225183.1 NZ_CP021892:509423-509704 [Bacillus subtilis subsp. subtilis]
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHFAEC
EAETTVERLVSGG

Download         Length: 282 bp

>AT77791 NZ_CP021892:509423-509704 [Bacillus subtilis subsp. subtilis]
TTGTCTGAATCCAGCGCAAGAACCGAAATGAAAATCAGCTTGCCCGAAAACCTAGTAGCTGAATTGGATGGTGTAGCGAT
GCGGGAGAAACGAAGCAGAAACGAACTGATATCACAAGCAGTGAGAGCATATGTCAGCGAACGAACAACTCGTCACAACC
GTGATTTGATGAGACGCGGCTATATGGAAATGGCGAAAATCAACCTGAATATTTCTTCTGAGGCTCACTTTGCGGAGTGC
GAGGCTGAAACGACAGTTGAGCGCTTAGTCAGCGGAGGATAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
PDB 4MDX
PDB 4ME7
PDB 1NE8


Antitoxin

Source ID Structure
PDB 4ME7
AlphaFold DB G4NU32

References