77311

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/Cpta(toxin)
Location 4403038..4403695 Replicon chromosome
Accession NZ_CP021751
Organism Klebsiella pneumoniae strain AR_0113

Toxin (Protein)


Gene name cptA Uniprot ID W8UCT0
Locus tag AM360_RS22170 Protein ID WP_002916310.1
Coordinates 4403038..4403448 (-) Length 137 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID W8UQ37
Locus tag AM360_RS22175 Protein ID WP_002916312.1
Coordinates 4403429..4403695 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AM360_RS22150 4399038..4400771 - 1734 WP_004151783.1 single-stranded-DNA-specific exonuclease RecJ -
AM360_RS22155 4400777..4401490 - 714 WP_002916301.1 bifunctional protein-disulfide isomerase/oxidoreductase DsbC -
AM360_RS22160 4401513..4402409 - 897 WP_004144729.1 site-specific tyrosine recombinase XerD -
AM360_RS22165 4402510..4403031 + 522 WP_002916308.1 flavodoxin FldB -
AM360_RS22170 4403038..4403448 - 411 WP_002916310.1 protein YgfX Toxin
AM360_RS22175 4403429..4403695 - 267 WP_002916312.1 FAD assembly factor SdhE Antitoxin
AM360_RS22180 4403941..4404924 + 984 WP_002916313.1 tRNA-modifying protein YgfZ -
AM360_RS22185 4405075..4405734 - 660 WP_002916317.1 hemolysin III family protein -
AM360_RS22190 4405898..4406209 - 312 WP_002916319.1 N(4)-acetylcytidine aminohydrolase -
AM360_RS22195 4406259..4406987 + 729 WP_002916321.1 MurR/RpiR family transcriptional regulator -
AM360_RS22200 4407106..4408539 + 1434 WP_002916322.1 6-phospho-beta-glucosidase BglA -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Inner membrane protein YgfX

(3-132)

Antitoxin

Flavinator of succinate dehydrogenase

(7-79)


Sequences

Toxin        


Download         Length: 137 a.a.        Molecular weight: 16049.85 Da        Isoelectric Point: 11.4778

>T77311 WP_002916310.1 NZ_CP021751:c4403448-4403038 [Klebsiella pneumoniae]
VVLWQSDLRISWRAQWFSLLLHGVVAALVLLVPWPLSYTPIWLLLLSLVVFDCVRSQRRIHARRGEIKLLTDSRLRWQNA
EWEILGTPWVINSGMLLRLRHVDTRRGQHLWLAADSMDAGEWRDLRRLVLQKPAQE

Download         Length: 411 bp

>T77311 NZ_CP021751:c4403448-4403038 [Klebsiella pneumoniae]
GTGGTCCTGTGGCAATCTGATCTCCGTATCTCCTGGCGCGCGCAGTGGTTTTCCCTGCTGCTTCACGGCGTGGTGGCGGC
CCTGGTGCTGTTGGTTCCCTGGCCGCTGAGCTATACCCCGATCTGGCTGCTGCTGCTGTCGCTGGTGGTCTTCGACTGCG
TGCGCAGCCAGCGGCGGATCCATGCCCGTCGCGGGGAGATAAAACTGCTCACCGATTCCCGTCTTCGCTGGCAAAACGCC
GAATGGGAAATCCTCGGGACGCCGTGGGTTATCAATAGCGGTATGCTGCTGCGTTTGCGCCATGTCGATACCCGGCGCGG
ACAGCATCTTTGGCTGGCGGCGGACAGCATGGACGCCGGAGAGTGGCGCGATCTGCGCCGGCTGGTGCTGCAAAAACCGG
CGCAGGAGTAA

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 10480.98 Da        Isoelectric Point: 5.1116

>AT77311 WP_002916312.1 NZ_CP021751:c4403695-4403429 [Klebsiella pneumoniae]
MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDADKQLFIRLLENDDPDLFNWLMNHGKPADAELQRMVTLIQTRN
RERGPVAI

Download         Length: 267 bp

>AT77311 NZ_CP021751:c4403695-4403429 [Klebsiella pneumoniae]
ATGGACATTAACAATAAAGCACGTATCCACTGGGCATGCCGCCGCGGGATGCGCGAACTCGACATCTCCATCATGCCGTT
CTTTGAGTATGAGTACGATACCCTCAGCGACGCTGACAAACAGCTGTTCATTCGCCTGCTGGAAAATGACGATCCGGATC
TGTTCAACTGGCTGATGAACCACGGCAAACCGGCCGATGCGGAGCTGCAGCGGATGGTAACCTTAATTCAGACACGGAAT
CGGGAACGTGGTCCTGTGGCAATCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H3GSW7

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GY41

References