76722

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 34021..34552 Replicon plasmid pAP1342-5
Accession NZ_CP021514
Organism Acetobacter pasteurianus subsp. Pasteurianus strain SRCM101342

Toxin (Protein)


Gene name relE Uniprot ID A0A1Y0YAV6
Locus tag S1001342_RS15950 Protein ID WP_042789027.1
Coordinates 34021..34317 (-) Length 99 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID A0A1Y0YF37
Locus tag S1001342_RS15955 Protein ID WP_042789025.1
Coordinates 34307..34552 (-) Length 82 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
S1001342_RS15935 29257..32376 + 3120 WP_157668628.1 hypothetical protein -
S1001342_RS15940 32451..33170 + 720 WP_087652392.1 hypothetical protein -
S1001342_RS15945 33252..34013 + 762 WP_087652393.1 hypothetical protein -
S1001342_RS15950 34021..34317 - 297 WP_042789027.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
S1001342_RS15955 34307..34552 - 246 WP_042789025.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
S1001342_RS15960 34672..34959 - 288 WP_087652394.1 type II toxin-antitoxin system RelE/ParE family toxin -
S1001342_RS15965 34919..35179 - 261 WP_087652405.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
S1001342_RS15970 35402..36862 - 1461 WP_087652395.1 phage major capsid protein -
S1001342_RS15975 37025..37681 - 657 WP_087652396.1 HK97 family phage prohead protease -
S1001342_RS15980 37699..38979 - 1281 WP_087652397.1 phage portal protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..43021 43021


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Type I toxin-antitoxin system, toxin Ldr

(1-35)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 14588.50 Da        Isoelectric Point: 5.5500

>T76722 WP_042789027.1 NZ_CP021514:c34317-34021 [Acetobacter pasteurianus subsp. Pasteurianus]
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FFFFFFFFFFFFFFFFFFF

Download         Length: 297 bp

>T76722 NZ_CP021514:c34317-34021 [Acetobacter pasteurianus subsp. Pasteurianus]
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Antitoxin


Download         Length: 82 a.a.        Molecular weight: 12086.50 Da        Isoelectric Point: 5.5500

>AT76722 WP_042789025.1 NZ_CP021514:c34552-34307 [Acetobacter pasteurianus subsp. Pasteurianus]
FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
FF

Download         Length: 246 bp

>AT76722 NZ_CP021514:c34552-34307 [Acetobacter pasteurianus subsp. Pasteurianus]
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A1Y0YAV6

Antitoxin

Source ID Structure
AlphaFold DB A0A1Y0YF37

References