Detailed information of TA system TA076608

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): /BrnT(toxin)
• Location: 2166331..2166863
• Replicon: chromosome
• Accession: NZ_CP021416
• Organism: Sulfurospirillum sp. SL2-1

Toxin (Protein)

• Gene name: -
• Uniprot ID: -
• Locus tag: Sdiek1_RS11020
• Protein ID: WP_192866743.1
• Coordinates: 2166331..2166585 (+)
• Length: 85 a.a.

Antitoxin (Protein)

• Gene name: -
• Uniprot ID: -
• Locus tag: Sdiek1_RS11025
• Protein ID: WP_192866744.1
• Coordinates: 2166582..2166863 (+)
• Length: 94 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
Sdiek1_RS11010	2165005..2165631	+	627	WP_161492035.1	LysE family translocator	-
Sdiek1_RS11015	2165596..2165952	-	357	WP_087439161.1	hemerythrin family protein	-
Sdiek1_RS11020	2166331..2166585	+	255	WP_192866743.1	BrnT family toxin	Toxin
Sdiek1_RS11025	2166582..2166863	+	282	WP_192866744.1	CopG family transcriptional regulator	Antitoxin
Sdiek1_RS11030	2166872..2167354	-	483	WP_087439163.1	hypothetical protein	-
Sdiek1_RS11035	2167452..2167691	-	240	WP_087439164.1	hypothetical protein	-
Sdiek1_RS11040	2167704..2167925	-	222	WP_087439165.1	hypothetical protein	-
Sdiek1_RS11045	2168223..2169065	+	843	WP_087439166.1	hypothetical protein	-
Sdiek1_RS11050	2169185..2169595	+	411	WP_087439167.1	hypothetical protein	-
Sdiek1_RS11055	2169826..2170065	+	240	WP_087439168.1	hypothetical protein	-
Sdiek1_RS11060	2170224..2170553	+	330	WP_087439169.1	hypothetical protein	-
Sdiek1_RS14875	2170550..2170687	+	138	WP_161492036.1	hypothetical protein	-
Sdiek1_RS11065	2170687..2171664	+	978	WP_087439170.1	type II and III secretion system protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Ribonuclease toxin, BrnT, of type II toxin-antitoxin system (4-80)

Antitoxin

No domain identified.

Sequences

Toxin

Protein

• Length: 85 a.a.
• Molecular weight: 10132.54 Da
• Isoelectric Point: 5.6436

>T76608 WP_192866743.1 NZ_CP021416:2166331-2166585 [Sulfurospirillum sp. SL2-1]
MFEYDETKSKANKEKHGIDFEEAQALWQNKQHIVFDSVYVNDEWRHLLVGLIDDLCYVAVFTMREDNIRIISVRRCRKNE
KEIL

Nucleotide

• Length: 255 bp

>T76608 NZ_CP021416:2166331-2166585 [Sulfurospirillum sp. SL2-1]
ATGTTTGAATACGATGAAACAAAGAGTAAAGCCAATAAAGAAAAACACGGGATTGACTTTGAAGAAGCACAAGCTCTTTG
GCAAAACAAACAACATATAGTTTTTGATAGTGTTTATGTCAATGATGAATGGCGTCATCTTTTAGTTGGTCTTATTGATG
ATCTTTGTTATGTAGCTGTATTCACTATGCGTGAAGATAATATCCGTATTATCAGCGTTAGACGATGTCGAAAAAATGAA
AAGGAAATATTATGA

Antitoxin

Protein

• Length: 94 a.a.
• Molecular weight: 10757.57 Da
• Isoelectric Point: 9.5957

>AT76608 WP_192866744.1 NZ_CP021416:2166582-2166863 [Sulfurospirillum sp. SL2-1]
MKTISAEEFDKKFDNGEDILPYIDLSSKRTLKEFEKEMLAIKKVNVDLPSWAIASLDQEAKRMGVTRQSIIKMWLIQKLD
DLSLNRKSLKQVG

Nucleotide

• Length: 282 bp

>AT76608 NZ_CP021416:2166582-2166863 [Sulfurospirillum sp. SL2-1]
ATGAAAACAATATCAGCGGAAGAATTTGATAAAAAATTTGATAATGGTGAAGATATATTACCTTATATTGATCTCTCTTC
AAAAAGAACACTTAAAGAGTTTGAAAAAGAGATGCTAGCTATAAAAAAAGTAAATGTTGATCTTCCATCTTGGGCTATTG
CCTCTTTAGATCAAGAAGCTAAACGTATGGGTGTTACGCGTCAATCTATCATTAAAATGTGGCTTATACAAAAGCTTGAT
GATCTTAGTCTTAACCGTAAGTCTTTAAAGCAAGTGGGATAA