Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | /Xre(antitoxin) |
Location | 1007244..1008350 | Replicon | chromosome |
Accession | NZ_CP021138 | ||
Organism | Sulfuriferula sp. AH1 |
Toxin (Protein)
Gene name | - | Uniprot ID | - |
Locus tag | CAP31_RS05255 | Protein ID | WP_087446575.1 |
Coordinates | 1007604..1008350 (+) | Length | 249 a.a. |
Antitoxin (Protein)
Gene name | - | Uniprot ID | - |
Locus tag | CAP31_RS05250 | Protein ID | WP_087446574.1 |
Coordinates | 1007244..1007603 (+) | Length | 120 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
CAP31_RS05235 | 1002963..1004357 | + | 1395 | WP_087446571.1 | aspartate aminotransferase family protein | - |
CAP31_RS05240 | 1004338..1005561 | + | 1224 | WP_087446572.1 | RimK family alpha-L-glutamate ligase | - |
CAP31_RS05245 | 1005545..1007098 | + | 1554 | WP_157662658.1 | hypothetical protein | - |
CAP31_RS05250 | 1007244..1007603 | + | 360 | WP_087446574.1 | MbcA/ParS/Xre antitoxin family protein | Antitoxin |
CAP31_RS05255 | 1007604..1008350 | + | 747 | WP_087446575.1 | RES family NAD+ phosphorylase | Toxin |
CAP31_RS05260 | 1008431..1009633 | - | 1203 | WP_087446576.1 | ammonium transporter | - |
CAP31_RS05265 | 1009830..1010633 | - | 804 | WP_087446577.1 | twin-arginine translocase subunit TatC | - |
CAP31_RS05270 | 1010630..1011052 | - | 423 | WP_087446578.1 | Sec-independent protein translocase protein TatB | - |
CAP31_RS05275 | 1011061..1011273 | - | 213 | WP_087446579.1 | Sec-independent protein translocase subunit TatA | - |
CAP31_RS05280 | 1011286..1011624 | - | 339 | WP_087446580.1 | histidine triad nucleotide-binding protein | - |
CAP31_RS05285 | 1011621..1011944 | - | 324 | WP_087446581.1 | phosphoribosyl-ATP diphosphatase | - |
CAP31_RS05290 | 1011941..1012336 | - | 396 | WP_087446582.1 | phosphoribosyl-AMP cyclohydrolase | - |
CAP31_RS05295 | 1012333..1013094 | - | 762 | WP_087446583.1 | imidazole glycerol phosphate synthase subunit HisF | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 249 a.a. Molecular weight: 27484.47 Da Isoelectric Point: 6.3445
>T76031 WP_087446575.1 NZ_CP021138:1007604-1008350 [Sulfuriferula sp. AH1]
VVDWSLCLAEAELRSLSGVLLRLVESQEQVATNQLVSSLERQLVLEDMLEATKPRLRAETRGLHYLLATPFRYPPLKHGS
RFSTRNAPSLFYGALETGTVLAEAAYYRFLFWYGMATPPAGKLDTQHTLFGAEYRTGKGLQLQALPFASYREVLTSPSDY
GPTQVLGAEMRTAGVEAFEFISVRDPEGGINVALFTPAALGAKAPVFQEPWLCEVTAERVRFHAAHSRTLYTFPIEVFLV
EGKLPQAA
VVDWSLCLAEAELRSLSGVLLRLVESQEQVATNQLVSSLERQLVLEDMLEATKPRLRAETRGLHYLLATPFRYPPLKHGS
RFSTRNAPSLFYGALETGTVLAEAAYYRFLFWYGMATPPAGKLDTQHTLFGAEYRTGKGLQLQALPFASYREVLTSPSDY
GPTQVLGAEMRTAGVEAFEFISVRDPEGGINVALFTPAALGAKAPVFQEPWLCEVTAERVRFHAAHSRTLYTFPIEVFLV
EGKLPQAA
Download Length: 747 bp
>T76031 NZ_CP021138:1007604-1008350 [Sulfuriferula sp. AH1]
GTGGTCGATTGGTCTCTTTGTCTGGCAGAAGCCGAATTGCGCAGTCTGTCAGGCGTGCTGTTGCGGCTGGTAGAGAGCCA
GGAGCAGGTTGCGACCAACCAGCTGGTCAGTTCGCTGGAGCGGCAATTGGTGCTGGAGGATATGCTGGAGGCGACAAAAC
CGCGTCTGCGTGCGGAAACCAGGGGGCTTCACTACCTGCTGGCGACACCGTTTCGCTATCCGCCATTGAAACACGGTTCG
CGTTTCAGCACGCGTAACGCACCAAGCCTGTTTTACGGGGCGCTGGAAACCGGCACGGTGCTGGCAGAAGCTGCCTATTA
CCGATTCCTGTTCTGGTACGGCATGGCGACGCCGCCTGCGGGCAAACTTGATACGCAGCATACCCTGTTTGGCGCCGAAT
ACCGCACAGGGAAGGGGCTGCAGCTACAAGCCTTGCCGTTCGCAAGTTATCGTGAAGTGCTGACCAGTCCATCGGATTAC
GGACCGACTCAGGTGCTCGGTGCCGAGATGCGCACAGCCGGGGTCGAGGCATTCGAATTCATCTCTGTGCGCGATCCGGA
AGGCGGCATCAATGTCGCTTTATTCACGCCTGCGGCGCTAGGCGCAAAGGCTCCGGTGTTTCAGGAACCGTGGTTATGTG
AGGTAACTGCAGAACGGGTTCGTTTTCATGCTGCGCATAGTCGCACGCTGTACACGTTTCCCATCGAGGTGTTCCTGGTT
GAGGGTAAATTACCGCAAGCTGCCTGA
GTGGTCGATTGGTCTCTTTGTCTGGCAGAAGCCGAATTGCGCAGTCTGTCAGGCGTGCTGTTGCGGCTGGTAGAGAGCCA
GGAGCAGGTTGCGACCAACCAGCTGGTCAGTTCGCTGGAGCGGCAATTGGTGCTGGAGGATATGCTGGAGGCGACAAAAC
CGCGTCTGCGTGCGGAAACCAGGGGGCTTCACTACCTGCTGGCGACACCGTTTCGCTATCCGCCATTGAAACACGGTTCG
CGTTTCAGCACGCGTAACGCACCAAGCCTGTTTTACGGGGCGCTGGAAACCGGCACGGTGCTGGCAGAAGCTGCCTATTA
CCGATTCCTGTTCTGGTACGGCATGGCGACGCCGCCTGCGGGCAAACTTGATACGCAGCATACCCTGTTTGGCGCCGAAT
ACCGCACAGGGAAGGGGCTGCAGCTACAAGCCTTGCCGTTCGCAAGTTATCGTGAAGTGCTGACCAGTCCATCGGATTAC
GGACCGACTCAGGTGCTCGGTGCCGAGATGCGCACAGCCGGGGTCGAGGCATTCGAATTCATCTCTGTGCGCGATCCGGA
AGGCGGCATCAATGTCGCTTTATTCACGCCTGCGGCGCTAGGCGCAAAGGCTCCGGTGTTTCAGGAACCGTGGTTATGTG
AGGTAACTGCAGAACGGGTTCGTTTTCATGCTGCGCATAGTCGCACGCTGTACACGTTTCCCATCGAGGTGTTCCTGGTT
GAGGGTAAATTACCGCAAGCTGCCTGA
Antitoxin
Download Length: 120 a.a. Molecular weight: 13072.02 Da Isoelectric Point: 6.7179
>AT76031 WP_087446574.1 NZ_CP021138:1007244-1007603 [Sulfuriferula sp. AH1]
MSLALVPDTEKSSVLTEALANAGKHLGMNQSDLGEVIGKNRTAISRGDIDPDSKAGELALLFIRCYRSLFVLVGGDFQQM
RHWMQTENLHTGGIPREQIKSVQGLTTVLEYLDAMRGKL
MSLALVPDTEKSSVLTEALANAGKHLGMNQSDLGEVIGKNRTAISRGDIDPDSKAGELALLFIRCYRSLFVLVGGDFQQM
RHWMQTENLHTGGIPREQIKSVQGLTTVLEYLDAMRGKL
Download Length: 360 bp
>AT76031 NZ_CP021138:1007244-1007603 [Sulfuriferula sp. AH1]
ATGAGTTTGGCGCTTGTACCCGATACTGAAAAATCCAGTGTCCTCACAGAAGCTTTGGCTAATGCCGGCAAGCACTTGGG
TATGAATCAGTCAGACCTCGGCGAAGTGATAGGCAAAAATCGCACTGCGATCAGCCGCGGCGACATCGACCCTGACAGCA
AGGCCGGGGAGCTGGCGTTGTTGTTCATCCGCTGTTATCGCTCGCTTTTTGTGCTGGTCGGAGGGGATTTTCAGCAGATG
CGGCACTGGATGCAGACTGAAAACCTGCATACAGGCGGCATTCCGCGCGAGCAGATCAAAAGCGTACAAGGCCTGACCAC
GGTGCTGGAATATCTGGATGCCATGCGGGGCAAGCTGTAA
ATGAGTTTGGCGCTTGTACCCGATACTGAAAAATCCAGTGTCCTCACAGAAGCTTTGGCTAATGCCGGCAAGCACTTGGG
TATGAATCAGTCAGACCTCGGCGAAGTGATAGGCAAAAATCGCACTGCGATCAGCCGCGGCGACATCGACCCTGACAGCA
AGGCCGGGGAGCTGGCGTTGTTGTTCATCCGCTGTTATCGCTCGCTTTTTGTGCTGGTCGGAGGGGATTTTCAGCAGATG
CGGCACTGGATGCAGACTGAAAACCTGCATACAGGCGGCATTCCGCGCGAGCAGATCAAAAGCGTACAAGGCCTGACCAC
GGTGCTGGAATATCTGGATGCCATGCGGGGCAAGCTGTAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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