Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) slvAT/RES(toxin)
Location 116414..117369 Replicon plasmid unnamed2
Accession NZ_CP021077
Organism Burkholderia glumae strain 957856-41-c

Toxin (Protein)


Gene name slvT Uniprot ID -
Locus tag B7759_RS30670 Protein ID WP_017924249.1
Coordinates 116836..117369 (+) Length 178 a.a.

Antitoxin (Protein)


Gene name slvA Uniprot ID -
Locus tag B7759_RS30665 Protein ID WP_017924250.1
Coordinates 116414..116839 (+) Length 142 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
B7759_RS30645 (B7759_06043) 111513..112370 - 858 WP_012734037.1 plasmid replication initiator TrfA -
B7759_RS30650 (B7759_06044) 113125..114090 - 966 WP_012734036.1 ParB/RepB/Spo0J family partition protein -
B7759_RS30655 (B7759_06045) 114090..114761 - 672 WP_012734035.1 AAA family ATPase -
B7759_RS30660 (B7759_06047) 116082..116267 + 186 WP_171467077.1 hypothetical protein -
B7759_RS30665 (B7759_06048) 116414..116839 + 426 WP_017924250.1 DUF2384 domain-containing protein Antitoxin
B7759_RS30670 (B7759_06049) 116836..117369 + 534 WP_017924249.1 RES family NAD+ phosphorylase Toxin
B7759_RS30675 (B7759_06050) 117530..117727 + 198 WP_127840952.1 hypothetical protein -
B7759_RS30680 (B7759_06051) 118120..118404 + 285 WP_017432347.1 hypothetical protein -
B7759_RS30685 (B7759_06052) 118418..118660 + 243 WP_124837682.1 hypothetical protein -
B7759_RS30690 (B7759_06053) 118657..118902 + 246 WP_127913916.1 hypothetical protein -
B7759_RS30695 (B7759_06054) 118959..119300 + 342 WP_012732710.1 hypothetical protein -
B7759_RS30700 (B7759_06055) 119303..121138 + 1836 WP_012732711.1 site-specific integrase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..168969 168969


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(11-168)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 178 a.a.        Molecular weight: 19131.69 Da        Isoelectric Point: 5.1753

>T75955 WP_017924249.1 NZ_CP021077:116836-117369 [Burkholderia glumae]
MILTPLQDITAYRMHVPKWAVAPTSGAGAARAGGRANRVGTPALYLALEVATAVAEYQQLSPLLPPGTLVSYRVTATPVV
DFTGGFRADLWPPLWESFFCDWRRDWFNARIEPPSWVLGDEAIAAGAKGILFRSTQATGGTNLVLFVDQLGEGDRLDVHD
PAGALPRDQASWDGPSR

Download         Length: 534 bp

>T75955 NZ_CP021077:116836-117369 [Burkholderia glumae]
ATGATCCTCACGCCGCTGCAGGACATTACCGCCTACCGAATGCACGTGCCCAAGTGGGCCGTGGCACCCACCAGTGGCGC
GGGTGCCGCCCGGGCCGGCGGCCGGGCGAACCGGGTTGGCACGCCGGCGCTGTATCTGGCGCTCGAGGTGGCCACCGCAG
TGGCCGAGTACCAGCAGCTGTCGCCGCTGCTGCCGCCCGGCACGCTGGTGAGCTATCGGGTCACGGCGACGCCCGTGGTC
GATTTCACCGGCGGCTTTCGCGCGGATCTCTGGCCGCCTTTGTGGGAATCCTTCTTCTGCGACTGGCGCCGCGACTGGTT
TAATGCGCGCATCGAGCCGCCCAGCTGGGTGCTGGGCGATGAGGCGATCGCCGCCGGCGCAAAAGGGATCCTGTTTCGGT
CGACGCAGGCCACCGGCGGCACGAACCTGGTGCTGTTCGTCGACCAGCTGGGGGAGGGCGATCGCCTGGACGTCCACGAC
CCAGCCGGCGCCTTGCCGCGTGATCAGGCTTCATGGGACGGCCCCTCGAGGTGA

Antitoxin


Download         Length: 142 a.a.        Molecular weight: 14935.78 Da        Isoelectric Point: 6.4664

>AT75955 WP_017924250.1 NZ_CP021077:116414-116839 [Burkholderia glumae]
MSTLAATRAPAAPAGGPAPASFDAFLSALREPDTAAPVLSARRYVAALNIDLQTLADQAHVHRNTVARAPQSASVQQFLR
EAIRVIRAATDLSGDVQRALFWYRNEPLAVFDYQTAETLVSAGRADDVVRYVASLEAGAAG

Download         Length: 426 bp

>AT75955 NZ_CP021077:116414-116839 [Burkholderia glumae]
ATGAGCACCCTCGCAGCCACCCGAGCACCCGCCGCGCCAGCCGGCGGCCCGGCCCCGGCAAGCTTTGATGCATTCCTGAG
TGCGTTGCGCGAGCCGGACACGGCAGCCCCGGTGCTGTCGGCCCGTCGCTACGTGGCGGCCCTCAACATCGACCTGCAGA
CGCTCGCCGACCAGGCTCACGTCCACCGCAACACCGTCGCCCGCGCGCCGCAGTCGGCCAGCGTCCAGCAGTTCCTGCGC
GAGGCGATCCGCGTGATCCGCGCCGCGACGGATCTGTCGGGCGACGTCCAGCGCGCGCTGTTCTGGTATCGCAACGAGCC
GCTGGCCGTGTTTGACTACCAGACGGCCGAAACCCTGGTGTCGGCCGGCCGCGCCGATGACGTGGTGCGCTATGTGGCGT
CGCTCGAGGCGGGCGCCGCCGGATGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References