Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) rlegTA/AbiEii-AbiEi
Location 3899482..3901010 Replicon chromosome
Accession NZ_CP021056
Organism Richelia sinica FACHB-800 strain FACHB 800

Toxin (Protein)


Gene name rlegT Uniprot ID -
Locus tag B6N60_RS16390 Protein ID WP_190602247.1
Coordinates 3899482..3900417 (-) Length 312 a.a.

Antitoxin (Protein)


Gene name rlegA Uniprot ID -
Locus tag B6N60_RS16395 Protein ID WP_190602249.1
Coordinates 3900414..3901010 (-) Length 199 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
B6N60_RS16370 (B6N60_03616) 3894536..3896848 + 2313 WP_190602556.1 penicillin-binding protein 1A -
B6N60_RS16375 (B6N60_03617) 3897003..3897224 + 222 WP_190602558.1 hypothetical protein -
B6N60_RS24615 (B6N60_03618) 3897250..3897372 - 123 WP_256443767.1 hypothetical protein -
B6N60_RS16380 (B6N60_03619) 3897528..3897950 - 423 WP_190602243.1 TerB family tellurite resistance protein -
B6N60_RS16385 (B6N60_03620) 3898008..3899354 - 1347 WP_190602245.1 16S rRNA (cytosine(967)-C(5))-methyltransferase -
B6N60_RS16390 (B6N60_03621) 3899482..3900417 - 936 WP_190602247.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin
B6N60_RS16395 (B6N60_03622) 3900414..3901010 - 597 WP_190602249.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein Antitoxin
B6N60_RS16400 (B6N60_03623) 3901279..3901806 + 528 WP_190602251.1 Ycf51 family protein -
B6N60_RS16405 (B6N60_03624) 3902339..3903529 + 1191 WP_190602253.1 iron-containing alcohol dehydrogenase family protein -
B6N60_RS16410 (B6N60_03625) 3903526..3904731 + 1206 WP_190602255.1 aspartate aminotransferase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(39-275)

Antitoxin

Transcriptional regulator, AbiEi antitoxin

(6-52)


Sequences

Toxin        


Download         Length: 312 a.a.        Molecular weight: 36146.74 Da        Isoelectric Point: 9.0100

>T75926 WP_190602247.1 NZ_CP021056:c3900417-3899482 [Richelia sinica FACHB-800]
MSSKKITNIAASIQGKLQKLRQERKEDYNYLLMRYFGERLLYRISRSQYQKKFILKGATLFRVWNGEPHRATKDLDLLCF
GNNEIEDLDKIFKEICLIHCPEDGVIFLPESVQGKIIKEDQEYEGVRINLQGKLGTSKPITIQVDIGFGDAVTPDAKEVE
IEPILDTPKPLLRIYPRETVIAEKFQAMVYLGIKNSRMKDFYDIWFLSRNYEFQGNLLCQAFKKTFERRKTAIPMQEPLA
LTQEFVNSSDKQKQWQAFLSKSRIGLTPNSFSEVINEIQKFIMPPCLAVAQNQKFDKLWITSGSWQDANHN

Download         Length: 936 bp

>T75926 NZ_CP021056:c3900417-3899482 [Richelia sinica FACHB-800]
ATGAGTTCAAAAAAGATTACTAATATAGCAGCCTCTATCCAAGGTAAATTACAGAAATTACGTCAGGAAAGAAAAGAAGA
TTATAACTACTTGTTAATGCGGTATTTTGGTGAAAGGCTGCTTTATAGAATTAGTCGCTCCCAATATCAAAAAAAATTTA
TTTTAAAAGGAGCCACTCTTTTTAGAGTCTGGAATGGTGAGCCTCATCGAGCAACGAAAGATTTAGACTTACTTTGTTTT
GGTAACAATGAAATTGAAGATTTAGACAAGATATTTAAGGAAATTTGCTTAATTCATTGTCCAGAAGATGGAGTTATATT
TCTGCCTGAATCTGTTCAAGGAAAAATCATAAAAGAAGACCAAGAATATGAAGGTGTAAGAATTAATTTGCAAGGGAAAT
TGGGTACAAGCAAACCAATTACTATTCAAGTAGATATTGGATTTGGTGACGCTGTTACACCTGATGCGAAAGAAGTAGAA
ATCGAACCTATCTTAGACACACCAAAACCGCTTTTACGAATATATCCTCGTGAAACAGTCATAGCTGAAAAGTTTCAAGC
AATGGTTTATCTAGGCATCAAAAATAGTCGCATGAAAGATTTTTATGATATTTGGTTTCTTTCCAGAAATTATGAATTTC
AAGGTAACTTACTTTGTCAAGCATTCAAAAAAACTTTTGAGAGGCGCAAAACAGCAATACCAATGCAAGAACCTTTAGCC
TTAACACAAGAATTTGTTAATAGTTCAGATAAGCAAAAGCAGTGGCAAGCTTTTTTAAGTAAATCGAGAATCGGTCTAAC
TCCGAATTCATTTAGCGAAGTAATTAATGAAATTCAAAAATTTATCATGCCACCTTGTCTAGCTGTTGCCCAAAACCAAA
AATTTGACAAATTATGGATTACATCAGGAAGTTGGCAAGATGCAAATCACAATTAA

Antitoxin


Download         Length: 199 a.a.        Molecular weight: 22550.31 Da        Isoelectric Point: 9.5578

>AT75926 WP_190602249.1 NZ_CP021056:c3901010-3900414 [Richelia sinica FACHB-800]
MSKKRQIVNYACKLGVVKAKDIQAKGIHRQHLKRLEDQGILIRSARGVYTFANANITKNHTLAEAATRIPNGVVCLLSAL
SFYELTTQTPFEVWLAIPQKSRSPKDDLLPLRIVYMSGKSLEEGIEEHQVEGIPVRVYSLPKTVADCFKFRNKIGLDVAI
EALQECWKEKRCSIDDLWHYAKICRVHNVMRPYLESLG

Download         Length: 597 bp

>AT75926 NZ_CP021056:c3901010-3900414 [Richelia sinica FACHB-800]
ATGTCGAAAAAACGGCAGATAGTAAATTATGCTTGCAAGCTAGGAGTAGTTAAAGCAAAAGATATACAAGCAAAAGGCAT
TCACAGACAACACCTGAAACGGCTAGAAGATCAGGGAATACTTATCCGTTCGGCCCGTGGTGTTTACACTTTTGCCAATG
CGAATATTACAAAAAATCATACCCTAGCTGAAGCTGCCACAAGAATTCCTAATGGAGTGGTTTGTCTTCTATCTGCGTTG
AGTTTCTATGAACTAACCACACAAACACCCTTTGAAGTATGGCTTGCTATCCCTCAAAAGTCCCGTTCTCCTAAAGATGA
TCTACTACCACTCAGAATTGTTTATATGTCAGGAAAATCACTGGAAGAGGGCATAGAAGAACATCAAGTAGAAGGTATTC
CAGTTCGTGTCTATTCCTTGCCAAAAACAGTGGCAGATTGCTTTAAATTTCGCAACAAAATTGGTCTCGATGTTGCTATT
GAAGCCCTCCAAGAATGCTGGAAAGAAAAAAGATGCTCAATAGATGATCTATGGCATTATGCTAAAATCTGCCGAGTACA
TAACGTGATGCGTCCTTATCTTGAGTCATTGGGATGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References