Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | rlegTA/AbiEii-AbiEi |
Location | 3899482..3901010 | Replicon | chromosome |
Accession | NZ_CP021056 | ||
Organism | Richelia sinica FACHB-800 strain FACHB 800 |
Toxin (Protein)
Gene name | rlegT | Uniprot ID | - |
Locus tag | B6N60_RS16390 | Protein ID | WP_190602247.1 |
Coordinates | 3899482..3900417 (-) | Length | 312 a.a. |
Antitoxin (Protein)
Gene name | rlegA | Uniprot ID | - |
Locus tag | B6N60_RS16395 | Protein ID | WP_190602249.1 |
Coordinates | 3900414..3901010 (-) | Length | 199 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
B6N60_RS16370 (B6N60_03616) | 3894536..3896848 | + | 2313 | WP_190602556.1 | penicillin-binding protein 1A | - |
B6N60_RS16375 (B6N60_03617) | 3897003..3897224 | + | 222 | WP_190602558.1 | hypothetical protein | - |
B6N60_RS24615 (B6N60_03618) | 3897250..3897372 | - | 123 | WP_256443767.1 | hypothetical protein | - |
B6N60_RS16380 (B6N60_03619) | 3897528..3897950 | - | 423 | WP_190602243.1 | TerB family tellurite resistance protein | - |
B6N60_RS16385 (B6N60_03620) | 3898008..3899354 | - | 1347 | WP_190602245.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase | - |
B6N60_RS16390 (B6N60_03621) | 3899482..3900417 | - | 936 | WP_190602247.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
B6N60_RS16395 (B6N60_03622) | 3900414..3901010 | - | 597 | WP_190602249.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin |
B6N60_RS16400 (B6N60_03623) | 3901279..3901806 | + | 528 | WP_190602251.1 | Ycf51 family protein | - |
B6N60_RS16405 (B6N60_03624) | 3902339..3903529 | + | 1191 | WP_190602253.1 | iron-containing alcohol dehydrogenase family protein | - |
B6N60_RS16410 (B6N60_03625) | 3903526..3904731 | + | 1206 | WP_190602255.1 | aspartate aminotransferase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 312 a.a. Molecular weight: 36146.74 Da Isoelectric Point: 9.0100
>T75926 WP_190602247.1 NZ_CP021056:c3900417-3899482 [Richelia sinica FACHB-800]
MSSKKITNIAASIQGKLQKLRQERKEDYNYLLMRYFGERLLYRISRSQYQKKFILKGATLFRVWNGEPHRATKDLDLLCF
GNNEIEDLDKIFKEICLIHCPEDGVIFLPESVQGKIIKEDQEYEGVRINLQGKLGTSKPITIQVDIGFGDAVTPDAKEVE
IEPILDTPKPLLRIYPRETVIAEKFQAMVYLGIKNSRMKDFYDIWFLSRNYEFQGNLLCQAFKKTFERRKTAIPMQEPLA
LTQEFVNSSDKQKQWQAFLSKSRIGLTPNSFSEVINEIQKFIMPPCLAVAQNQKFDKLWITSGSWQDANHN
MSSKKITNIAASIQGKLQKLRQERKEDYNYLLMRYFGERLLYRISRSQYQKKFILKGATLFRVWNGEPHRATKDLDLLCF
GNNEIEDLDKIFKEICLIHCPEDGVIFLPESVQGKIIKEDQEYEGVRINLQGKLGTSKPITIQVDIGFGDAVTPDAKEVE
IEPILDTPKPLLRIYPRETVIAEKFQAMVYLGIKNSRMKDFYDIWFLSRNYEFQGNLLCQAFKKTFERRKTAIPMQEPLA
LTQEFVNSSDKQKQWQAFLSKSRIGLTPNSFSEVINEIQKFIMPPCLAVAQNQKFDKLWITSGSWQDANHN
Download Length: 936 bp
>T75926 NZ_CP021056:c3900417-3899482 [Richelia sinica FACHB-800]
ATGAGTTCAAAAAAGATTACTAATATAGCAGCCTCTATCCAAGGTAAATTACAGAAATTACGTCAGGAAAGAAAAGAAGA
TTATAACTACTTGTTAATGCGGTATTTTGGTGAAAGGCTGCTTTATAGAATTAGTCGCTCCCAATATCAAAAAAAATTTA
TTTTAAAAGGAGCCACTCTTTTTAGAGTCTGGAATGGTGAGCCTCATCGAGCAACGAAAGATTTAGACTTACTTTGTTTT
GGTAACAATGAAATTGAAGATTTAGACAAGATATTTAAGGAAATTTGCTTAATTCATTGTCCAGAAGATGGAGTTATATT
TCTGCCTGAATCTGTTCAAGGAAAAATCATAAAAGAAGACCAAGAATATGAAGGTGTAAGAATTAATTTGCAAGGGAAAT
TGGGTACAAGCAAACCAATTACTATTCAAGTAGATATTGGATTTGGTGACGCTGTTACACCTGATGCGAAAGAAGTAGAA
ATCGAACCTATCTTAGACACACCAAAACCGCTTTTACGAATATATCCTCGTGAAACAGTCATAGCTGAAAAGTTTCAAGC
AATGGTTTATCTAGGCATCAAAAATAGTCGCATGAAAGATTTTTATGATATTTGGTTTCTTTCCAGAAATTATGAATTTC
AAGGTAACTTACTTTGTCAAGCATTCAAAAAAACTTTTGAGAGGCGCAAAACAGCAATACCAATGCAAGAACCTTTAGCC
TTAACACAAGAATTTGTTAATAGTTCAGATAAGCAAAAGCAGTGGCAAGCTTTTTTAAGTAAATCGAGAATCGGTCTAAC
TCCGAATTCATTTAGCGAAGTAATTAATGAAATTCAAAAATTTATCATGCCACCTTGTCTAGCTGTTGCCCAAAACCAAA
AATTTGACAAATTATGGATTACATCAGGAAGTTGGCAAGATGCAAATCACAATTAA
ATGAGTTCAAAAAAGATTACTAATATAGCAGCCTCTATCCAAGGTAAATTACAGAAATTACGTCAGGAAAGAAAAGAAGA
TTATAACTACTTGTTAATGCGGTATTTTGGTGAAAGGCTGCTTTATAGAATTAGTCGCTCCCAATATCAAAAAAAATTTA
TTTTAAAAGGAGCCACTCTTTTTAGAGTCTGGAATGGTGAGCCTCATCGAGCAACGAAAGATTTAGACTTACTTTGTTTT
GGTAACAATGAAATTGAAGATTTAGACAAGATATTTAAGGAAATTTGCTTAATTCATTGTCCAGAAGATGGAGTTATATT
TCTGCCTGAATCTGTTCAAGGAAAAATCATAAAAGAAGACCAAGAATATGAAGGTGTAAGAATTAATTTGCAAGGGAAAT
TGGGTACAAGCAAACCAATTACTATTCAAGTAGATATTGGATTTGGTGACGCTGTTACACCTGATGCGAAAGAAGTAGAA
ATCGAACCTATCTTAGACACACCAAAACCGCTTTTACGAATATATCCTCGTGAAACAGTCATAGCTGAAAAGTTTCAAGC
AATGGTTTATCTAGGCATCAAAAATAGTCGCATGAAAGATTTTTATGATATTTGGTTTCTTTCCAGAAATTATGAATTTC
AAGGTAACTTACTTTGTCAAGCATTCAAAAAAACTTTTGAGAGGCGCAAAACAGCAATACCAATGCAAGAACCTTTAGCC
TTAACACAAGAATTTGTTAATAGTTCAGATAAGCAAAAGCAGTGGCAAGCTTTTTTAAGTAAATCGAGAATCGGTCTAAC
TCCGAATTCATTTAGCGAAGTAATTAATGAAATTCAAAAATTTATCATGCCACCTTGTCTAGCTGTTGCCCAAAACCAAA
AATTTGACAAATTATGGATTACATCAGGAAGTTGGCAAGATGCAAATCACAATTAA
Antitoxin
Download Length: 199 a.a. Molecular weight: 22550.31 Da Isoelectric Point: 9.5578
>AT75926 WP_190602249.1 NZ_CP021056:c3901010-3900414 [Richelia sinica FACHB-800]
MSKKRQIVNYACKLGVVKAKDIQAKGIHRQHLKRLEDQGILIRSARGVYTFANANITKNHTLAEAATRIPNGVVCLLSAL
SFYELTTQTPFEVWLAIPQKSRSPKDDLLPLRIVYMSGKSLEEGIEEHQVEGIPVRVYSLPKTVADCFKFRNKIGLDVAI
EALQECWKEKRCSIDDLWHYAKICRVHNVMRPYLESLG
MSKKRQIVNYACKLGVVKAKDIQAKGIHRQHLKRLEDQGILIRSARGVYTFANANITKNHTLAEAATRIPNGVVCLLSAL
SFYELTTQTPFEVWLAIPQKSRSPKDDLLPLRIVYMSGKSLEEGIEEHQVEGIPVRVYSLPKTVADCFKFRNKIGLDVAI
EALQECWKEKRCSIDDLWHYAKICRVHNVMRPYLESLG
Download Length: 597 bp
>AT75926 NZ_CP021056:c3901010-3900414 [Richelia sinica FACHB-800]
ATGTCGAAAAAACGGCAGATAGTAAATTATGCTTGCAAGCTAGGAGTAGTTAAAGCAAAAGATATACAAGCAAAAGGCAT
TCACAGACAACACCTGAAACGGCTAGAAGATCAGGGAATACTTATCCGTTCGGCCCGTGGTGTTTACACTTTTGCCAATG
CGAATATTACAAAAAATCATACCCTAGCTGAAGCTGCCACAAGAATTCCTAATGGAGTGGTTTGTCTTCTATCTGCGTTG
AGTTTCTATGAACTAACCACACAAACACCCTTTGAAGTATGGCTTGCTATCCCTCAAAAGTCCCGTTCTCCTAAAGATGA
TCTACTACCACTCAGAATTGTTTATATGTCAGGAAAATCACTGGAAGAGGGCATAGAAGAACATCAAGTAGAAGGTATTC
CAGTTCGTGTCTATTCCTTGCCAAAAACAGTGGCAGATTGCTTTAAATTTCGCAACAAAATTGGTCTCGATGTTGCTATT
GAAGCCCTCCAAGAATGCTGGAAAGAAAAAAGATGCTCAATAGATGATCTATGGCATTATGCTAAAATCTGCCGAGTACA
TAACGTGATGCGTCCTTATCTTGAGTCATTGGGATGA
ATGTCGAAAAAACGGCAGATAGTAAATTATGCTTGCAAGCTAGGAGTAGTTAAAGCAAAAGATATACAAGCAAAAGGCAT
TCACAGACAACACCTGAAACGGCTAGAAGATCAGGGAATACTTATCCGTTCGGCCCGTGGTGTTTACACTTTTGCCAATG
CGAATATTACAAAAAATCATACCCTAGCTGAAGCTGCCACAAGAATTCCTAATGGAGTGGTTTGTCTTCTATCTGCGTTG
AGTTTCTATGAACTAACCACACAAACACCCTTTGAAGTATGGCTTGCTATCCCTCAAAAGTCCCGTTCTCCTAAAGATGA
TCTACTACCACTCAGAATTGTTTATATGTCAGGAAAATCACTGGAAGAGGGCATAGAAGAACATCAAGTAGAAGGTATTC
CAGTTCGTGTCTATTCCTTGCCAAAAACAGTGGCAGATTGCTTTAAATTTCGCAACAAAATTGGTCTCGATGTTGCTATT
GAAGCCCTCCAAGAATGCTGGAAAGAAAAAAGATGCTCAATAGATGATCTATGGCATTATGCTAAAATCTGCCGAGTACA
TAACGTGATGCGTCCTTATCTTGAGTCATTGGGATGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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