Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) rlegTA/AbiEii-AbiEi
Location 2501452..2502998 Replicon chromosome
Accession NZ_CP021023
Organism Sedimentisphaera salicampi strain ST-PulAB-D4

Toxin (Protein)


Gene name rlegT Uniprot ID -
Locus tag STSP1_RS09500 Protein ID WP_085756111.1
Coordinates 2502057..2502998 (+) Length 314 a.a.

Antitoxin (Protein)


Gene name rlegA Uniprot ID -
Locus tag STSP1_RS09495 Protein ID WP_085756110.1
Coordinates 2501452..2502060 (+) Length 203 a.a.

Genomic Context

STSP1_RS09480STSP1_RS09485STSP1_RS09490STSP1_RS09495STSP1_RS09500STSP1_RS09510STSP1_RS09515STSP1_RS09475STSP1_RS09520STSP1_RS09525
Location: 2499321..2499605 (285 bp)
Type: Others
Protein ID: WP_085756107.1
Location: 2499697..2500458 (762 bp)
Type: Others
Protein ID: WP_085756108.1
Location: 2500618..2501142 (525 bp)
Type: Others
Protein ID: WP_123807028.1
Location: 2501452..2502060 (609 bp)
Type: Antitoxin
Protein ID: WP_085756110.1
Location: 2502057..2502998 (942 bp)
Type: Toxin
Protein ID: WP_085756111.1
Location: 2503553..2504671 (1119 bp)
Type: Others
Protein ID: WP_123807029.1
Location: 2504716..2504934 (219 bp)
Type: Others
Protein ID: WP_085756114.1
Location: 2497511..2498932 (1422 bp)
Type: Others
Protein ID: WP_085756106.1
Location: 2504952..2506286 (1335 bp)
Type: Others
Protein ID: WP_085756115.1
Location: 2506481..2507899 (1419 bp)
Type: Others
Protein ID: WP_085756116.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
STSP1_RS094752497511..2498932-1422WP_085756106.1sigma 54-interacting transcriptional regulator-
STSP1_RS094802499321..2499605+285WP_085756107.1hypothetical protein-
STSP1_RS094852499697..2500458+762WP_085756108.1DUF3800 domain-containing protein-
STSP1_RS094902500618..2501142+525WP_123807028.1hypothetical protein-
STSP1_RS094952501452..2502060+609WP_085756110.1type IV toxin-antitoxin system AbiEi family antitoxin domain-containing proteinAntitoxin
STSP1_RS095002502057..2502998+942WP_085756111.1nucleotidyl transferase AbiEii/AbiGii toxin family proteinToxin
STSP1_RS095102503553..2504671+1119WP_123807029.1hypothetical protein-
STSP1_RS095152504716..2504934+219WP_085756114.1hypothetical protein-
STSP1_RS095202504952..2506286-1335WP_085756115.1DNA recombination protein RmuC-
STSP1_RS095252506481..2507899-1419WP_085756116.1sulfatase-like hydrolase/transferase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(39-266)

Antitoxin

Transcriptional regulator, AbiEi antitoxin

(7-53)


Sequences

Toxin        


Download         Length: 314 a.a.        Molecular weight: 36032.17 Da        Isoelectric Point: 8.8728

>T75904 WP_085756111.1 NZ_CP021023:2502057-2502998 [Sedimentisphaera salicampi]
MSNREKKNIADSILQRLKNYSQMQREDRGLTLTNYAIERFLYRLSNSQYAGQFVLKGAQLFRVWGNNPYRPTRDLDLLGF
GNPDVSQLEEVFRNICRVETDVQDGIIYKAESVRGQAIREDNMYDGVRIKLEYRIGRTGEFMQVDIGFGDAVDSSAKMVA
FPSILNMPAPELRVYPYELAVAEKVEAMAALGFANSRMKDFYDVYQLAGEFEFDGKLLAQAIQTTFKRRGTVIPEGLPTA
FTKEFCEDKLKQRQWEAFISKNSLKEISFPSAADKIKDFILPVLRALAESKSFELIWKPGRQWSKERKNWSNC

Download         Length: 942 bp

>T75904 NZ_CP021023:2502057-2502998 [Sedimentisphaera salicampi]
ATGAGCAATCGGGAAAAGAAAAACATAGCTGATTCCATTTTACAGCGTCTGAAAAATTATTCGCAGATGCAAAGGGAAGA
TCGCGGCCTTACGCTAACAAATTATGCAATAGAGCGTTTTCTTTATCGATTGAGCAATTCTCAATATGCCGGTCAGTTTG
TTCTCAAGGGAGCGCAGCTTTTTCGGGTATGGGGGAATAATCCTTACCGGCCAACGAGAGATCTTGATTTGCTTGGGTTC
GGCAATCCTGATGTTTCCCAGCTGGAGGAGGTTTTCAGAAATATTTGCCGGGTCGAAACTGATGTGCAGGACGGCATCAT
ATATAAAGCGGAATCTGTGAGAGGGCAGGCAATTCGGGAAGATAATATGTATGACGGCGTAAGGATTAAGCTTGAATACA
GAATAGGGCGTACGGGAGAATTTATGCAGGTAGATATTGGGTTTGGAGATGCGGTTGATTCTTCTGCAAAGATGGTTGCT
TTCCCCTCAATCCTGAATATGCCTGCCCCCGAGCTCAGGGTGTATCCATATGAACTGGCAGTGGCGGAAAAGGTTGAAGC
AATGGCAGCTCTTGGTTTTGCAAACAGTCGGATGAAAGACTTTTACGATGTGTATCAGCTTGCGGGAGAATTTGAATTCG
ACGGCAAACTCTTAGCTCAGGCGATTCAAACTACATTCAAGCGAAGGGGGACAGTGATACCAGAAGGGCTTCCCACTGCG
TTTACCAAAGAATTCTGCGAGGACAAATTGAAACAGAGGCAGTGGGAAGCTTTTATCTCAAAAAATAGCCTAAAAGAGAT
TTCTTTTCCATCAGCAGCAGACAAAATAAAAGATTTTATTCTTCCGGTGCTCAGAGCTTTGGCAGAAAGTAAAAGCTTTG
AACTTATTTGGAAACCCGGCAGACAATGGAGTAAAGAAAGAAAAAATTGGAGCAACTGTTAA

Antitoxin


Download         Length: 203 a.a.        Molecular weight: 23330.18 Da        Isoelectric Point: 10.3076

>AT75904 WP_085756110.1 NZ_CP021023:2501452-2502060 [Sedimentisphaera salicampi]
MGIKAQKLIENLRQYGMLKTGEIVELGISKEYLRKLTVQGTVERVSRGLYTLPNNDYSPMQSIAEVSKQVPKGVICLLSA
LRFHGFTTQNPFEVWIAIENRSRKPEIKASAKVRYVRFSQRAFTDGIQEKRIDQLKVRVYSPAKTVADCFKYRNKIGLDT
ALEALREGWREKRFTMDELWKYAKVCRVSNVMQPYLESITAL

Download         Length: 609 bp

>AT75904 NZ_CP021023:2501452-2502060 [Sedimentisphaera salicampi]
ATGGGAATAAAGGCTCAAAAACTTATCGAAAATCTTAGGCAGTATGGGATGCTCAAAACAGGAGAAATCGTTGAGCTTGG
CATCTCGAAGGAGTATCTTCGAAAGCTTACGGTACAAGGAACTGTGGAGAGGGTTTCCCGCGGCCTCTACACTCTTCCCA
ACAATGATTACTCGCCAATGCAGAGCATTGCTGAGGTTTCAAAACAGGTGCCCAAAGGTGTAATCTGCCTTCTTTCTGCT
CTGCGTTTTCACGGATTTACAACACAGAATCCATTTGAGGTTTGGATTGCGATAGAAAATCGTTCCCGCAAACCCGAAAT
TAAAGCTTCTGCTAAGGTGAGGTATGTTCGGTTTTCGCAAAGAGCATTTACCGACGGGATACAGGAGAAACGGATAGATC
AGCTTAAGGTGCGAGTTTATTCGCCGGCAAAGACGGTGGCGGATTGTTTTAAATATCGCAACAAGATAGGGCTGGATACG
GCTCTGGAAGCCCTTAGAGAAGGCTGGCGGGAAAAGCGTTTTACAATGGATGAGCTTTGGAAATACGCCAAAGTGTGCAG
GGTGAGCAATGTGATGCAGCCATATCTTGAAAGCATTACTGCATTATGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References